• TFisher

  • Referenced in 2 articles [sw22609]
  • package TFisher: Optimal Thresholding Fisher’s P-Value Combination Method. We provide the cumulative distribution ... collection of thresholding Fisher’s p-value combination methods, including Fisher’s p-value combination ... particular, soft-thresholding Fisher’s p-value combination method which is proven to be optimal ... Optimal Thresholding of Fisher’s P-value Combination Tests for Signal Detection”, submitted...
  • AS 307

  • Referenced in 57 articles [sw14162]
  • both depths in O(nlogn) time, by combining geometric properties with certain sorting and updating ... data description, bivariate confidence regions, p-values, quality indices and control charts. Moreover, the algorithm...
  • rp.flm.test

  • Referenced in 7 articles [sw28046]
  • wild bootstrap resampling and the combination of several p-values, arising from different projections...
  • EmpiricalBrownsMethod

  • Referenced in 1 article [sw36483]
  • EmpiricalBrownsMethod: Uses Brown’s method to combine p-values from dependent tests. Combining P-values ... procedure is non-trivial for dependent P-values. This package implements an empirical adaptation ... Fisher’s Method) for combining dependent P-values which is appropriate for highly correlated data...
  • TATES

  • Referenced in 3 articles [sw20044]
  • component of a multivariate trait, TATES combines p-values obtained in standard univariate GWAS...
  • chifish

  • Referenced in 1 article [sw34294]
  • using Fisher’s method of combining P values obtained by Fisher’s exact test. Input...
  • adaptTest

  • Referenced in 2 articles [sw10998]
  • terms of a combination function for the $p$-values of the separate stages, or alternatively...
  • INMEX

  • Referenced in 4 articles [sw26782]
  • allows researchers to combine multiple data sets based on P-values, effect sizes, rank orders...
  • ToppGene Suite

  • Referenced in 6 articles [sw30169]
  • combined into an overall score using statistical meta-analysis. A P-value of each annotation...
  • GlobalAncova

  • Referenced in 7 articles [sw30019]
  • mirrors deviations from the null hypothesis. In combination with a permutation approach, empirical significance levels ... approximated. Alternatively, an approximation yields asymptotic p-values. The framework is generalized to groups...
  • cpvSNP

  • Referenced in 1 article [sw35576]
  • analysis methods for SNP association p-values that lie in genes in given gene sets ... analysis methods exist to combine SNP-level association p-values into gene sets, calculating...
  • GNA

  • Referenced in 21 articles [sw35974]
  • network using knowledge about regulatory interactions in combination with gene expression data. Genetic Network Analyzer ... linear differential equations. Instead of exact numerical values for the parameters, which are often ... coli, and biodegradation of polluants by P. putida. See the list of publications below...
  • dSTEM

  • Referenced in 3 articles [sw36073]
  • algorithm, combined with the Benjamini-Hochberg procedure for thresholding p-values, provides asymptotic strong control...
  • BACP

  • Referenced in 6 articles [sw03472]
  • Castro and S. Manzano, “Variable and value ordering when solving balanced academic curriculum problems ... Constraints, 12 p. (2001), available at http://arxiv.org/abs/cs/0110007v1] but to combine a genetic algorithm...
  • DRIMust

  • Referenced in 1 article [sw29654]
  • presented individually with an accurate P-value indication and as a Position Specific Scoring Matrix ... unique in combining efficient search on large ranked lists with rigorous P-value assessment...
  • Norm 2.03

  • Referenced in 1 article [sw08149]
  • datum is replaced by m>1 simulated values. The resulting m versions of the complete ... results combined to produce inferential statements (e.g. interval estimates or p-values) that incorporate missing...
  • MiPred

  • Referenced in 5 articles [sw29580]
  • precursors using random forest prediction model with combined features. To distinguish the real pre-miRNAs ... secondary structure and P-value of randomization test is used. Besides, a novel machine-learning ... improvement was due to both the combined features and the RF algorithm. The MiPred...
  • SequentialMA

  • Referenced in 1 article [sw10526]
  • final $p$-values. We propose a meta-analysis approach to combining the results...
  • MPAT

  • Referenced in 2 articles [sw30865]
  • conducting multiple phenotype genetic association testings by combining uni-variate summary statistics for each phentype ... variety of situations. An overall p-value will be returned for assessing the significanceof associations...
  • genomicper

  • Referenced in 0 articles [sw15750]
  • complete set of SNP association p-values are permuted by rotation with respect ... uses fisher’s combination test to calculate a single gene p-value, followed...