
PRISM
 Referenced in 398 articles
[sw01186]
 supports three probabilistic models: discretetime Markov chains, Markov decision processes and continuoustime Markov...

CODA
 Referenced in 261 articles
[sw04290]
 MCMC , Output analysis and diagnostics for Markov Chain Monte Carlo simulations. Provides functions for summarizing ... plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests ... equilibrium distribution of the Markov chain...

BUGS
 Referenced in 336 articles
[sw07885]
 analysis of complex statistical models using Markov chain Monte Carlo (MCMC) methods. The project began...

spBayes
 Referenced in 305 articles
[sw10160]
 fitting such models involves computationally intensive Markov chain Monte Carlo (MCMC) methods whose efficiency depends...

GMRFLib
 Referenced in 265 articles
[sw06641]
 statistical inference is only possible using Markov Chain Monte Carlo (MCMC) techniques. The preeminent experts...

Expokit
 Referenced in 171 articles
[sw00258]
 critical importance in the area of Markov chains and furthermore, the computed solution is subject ... computation of transient states of Markov chains...

MCQueue
 Referenced in 137 articles
[sw05198]
 MCQueue: educational software for Markov Chains and Queues (noncommercial use) This software package contains ... discretetime and continuoustime Markov chains up to 100 states. The other module calculates...

JAGS
 Referenced in 180 articles
[sw08040]
 analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike...

PEPA
 Referenced in 113 articles
[sw10692]
 editor and performance analysers which use Markov chain or ODE methods or simulation. Performance results...

MLwiN
 Referenced in 92 articles
[sw04837]
 uses both maximum likelihood estimation and Markov Chain Monte Carlo (MCMC) methods. MLwiN is based...

boa
 Referenced in 82 articles
[sw04493]
 statistical and graphical analysis of Markov chain Monte Carlo sampling output...

Gibbsit
 Referenced in 71 articles
[sw25318]
 achieve a specified accuracy level in Markov chain Monte Carlo. An S translation...

OpenBUGS
 Referenced in 68 articles
[sw08316]
 system’, which determines an appropriate MCMC (Markov chain Monte Carlo) scheme (based on the Gibbs...

RINLA
 Referenced in 49 articles
[sw08014]
 compared with that obtained by Markov chain Monte Carlo, showing similar accuracy with only...

Mcmcpack
 Referenced in 48 articles
[sw07974]
 MCMCpack: Markov chain Monte Carlo (MCMC) Package. This package contains functions to perform Bayesian inference...

MrBayes
 Referenced in 43 articles
[sw07715]
 phylogenetic and evolutionary models. MrBayes uses Markov chain Monte Carlo (MCMC) methods to estimate...

MARCA
 Referenced in 30 articles
[sw00547]
 MARCA: Markov chain analyzer, a software package for Markov modeling MARCA is a software package ... facilitate the generation of large Markov chains and to compute transitent probability distributions...

BEAST
 Referenced in 43 articles
[sw12588]
 single tree topology. BEAST 2 uses Markov chain Monte Carlo (MCMC) to average over tree...

rjags
 Referenced in 41 articles
[sw08039]
 Bayesian data analysis. JAGS uses Markov Chain Monte Carlo (MCMC) to generate a sequence...

RStan
 Referenced in 41 articles
[sw13990]
 implements full Bayesian statistical inference via Markov Chain Monte Carlo, rough Bayesian inference via variational...