
PRISM
 Referenced in 376 articles
[sw01186]
 supports three probabilistic models: discretetime Markov chains, Markov decision processes and continuoustime Markov...

CODA
 Referenced in 195 articles
[sw04290]
 MCMC , Output analysis and diagnostics for Markov Chain Monte Carlo simulations. Provides functions for summarizing ... plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests ... equilibrium distribution of the Markov chain...

BUGS
 Referenced in 299 articles
[sw07885]
 analysis of complex statistical models using Markov chain Monte Carlo (MCMC) methods. The project began...

spBayes
 Referenced in 254 articles
[sw10160]
 fitting such models involves computationally intensive Markov chain Monte Carlo (MCMC) methods whose efficiency depends...

GMRFLib
 Referenced in 222 articles
[sw06641]
 statistical inference is only possible using Markov Chain Monte Carlo (MCMC) techniques. The preeminent experts...

Expokit
 Referenced in 149 articles
[sw00258]
 critical importance in the area of Markov chains and furthermore, the computed solution is subject ... computation of transient states of Markov chains...

MCQueue
 Referenced in 122 articles
[sw05198]
 MCQueue: educational software for Markov Chains and Queues (noncommercial use) This software package contains ... discretetime and continuoustime Markov chains up to 100 states. The other module calculates...

JAGS
 Referenced in 138 articles
[sw08040]
 analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike...

PEPA
 Referenced in 109 articles
[sw10692]
 editor and performance analysers which use Markov chain or ODE methods or simulation. Performance results...

MLwiN
 Referenced in 82 articles
[sw04837]
 uses both maximum likelihood estimation and Markov Chain Monte Carlo (MCMC) methods. MLwiN is based...

boa
 Referenced in 72 articles
[sw04493]
 statistical and graphical analysis of Markov chain Monte Carlo sampling output...

OpenBUGS
 Referenced in 62 articles
[sw08316]
 system’, which determines an appropriate MCMC (Markov chain Monte Carlo) scheme (based on the Gibbs...

Gibbsit
 Referenced in 60 articles
[sw25318]
 achieve a specified accuracy level in Markov chain Monte Carlo. An S translation...

MARCA
 Referenced in 30 articles
[sw00547]
 MARCA: Markov chain analyzer, a software package for Markov modeling MARCA is a software package ... facilitate the generation of large Markov chains and to compute transitent probability distributions...

RINLA
 Referenced in 42 articles
[sw08014]
 compared with that obtained by Markov chain Monte Carlo, showing similar accuracy with only...

Mcmcpack
 Referenced in 38 articles
[sw07974]
 MCMCpack: Markov chain Monte Carlo (MCMC) Package. This package contains functions to perform Bayesian inference...

SMART_
 Referenced in 33 articles
[sw04097]
 when the underlying process is a Markov chain. In addition, discreteevent simulation is always ... process, but certain classes of nonMarkov models can still be solved numerically. Finally, since...

MrBayes
 Referenced in 33 articles
[sw07715]
 phylogenetic and evolutionary models. MrBayes uses Markov chain Monte Carlo (MCMC) methods to estimate...

rjags
 Referenced in 33 articles
[sw08039]
 Bayesian data analysis. JAGS uses Markov Chain Monte Carlo (MCMC) to generate a sequence...

BEAST
 Referenced in 33 articles
[sw12588]
 single tree topology. BEAST 2 uses Markov chain Monte Carlo (MCMC) to average over tree...