
Holes
 Referenced in 8 articles
[sw15021]
 Holes: python package for persistent homology calculations. The Python module contains various functions to produce...

Pseanalysis
 Referenced in 6 articles
[sw23361]
 Analysis: a Python package for DNA/RNA and protein/peptide sequence analysis based on pseudo components ... genome/proteome analysis, we have developed a Python package called PseAnalysis. The powerful package...

HTSeq
 Referenced in 8 articles
[sw16898]
 wwwhuber.embl.de/HTSeq or from the Python Package Index https://pypi.python.org/pypi/HTSeq....

Seglearn
 Referenced in 5 articles
[sw23641]
 Seglearn: A Python Package for Learning Sequences and Time Series. Seglearn is an opensource ... python package for machine learning time series or sequences using a sliding window segmentation approach...

FluidSim
 Referenced in 4 articles
[sw25606]
 FluidSim: modular, objectoriented Python package for highperformance CFD simulations. The Python package fluidsim ... Python ecosystem and the Application Programming Interfaces (API) provided by fluiddyn and fluidfft packages (Mohanan ... design aspects of fluidsim, viz. use of Python as the main language; focus...

dynesty
 Referenced in 6 articles
[sw28387]
 present dynesty, a public, opensource, Python package to estimate Bayesian posteriors and evidences (marginal...

tslearn
 Referenced in 6 articles
[sw28447]
 tslearn is a Python package that provides machine learning tools for the analysis of time ... package builds on scikitlearn, numpy and scipy libraries. tslearn is a generalpurpose Python...

iFeature
 Referenced in 6 articles
[sw27776]
 iFeature: A python package and web server for features extraction and selection from protein ... peptide sequences. iFeature is a comprehensive Pythonbased toolkit for generating various numerical feature representation...

DirectDM
 Referenced in 6 articles
[sw31393]
 available as a Mathematica and a python package. The Mathematica package is available from: github.com...

ABCSysBio
 Referenced in 6 articles
[sw24739]
 questions. RESULTS: Here we present a Python package, ABCSysBio, that implements parameter inference...

InterpretML
 Referenced in 6 articles
[sw30904]
 Interpretability InterpretML is an opensource Python package which exposes machine learning interpretability algorithms...

yt
 Referenced in 6 articles
[sw28814]
 opensource, permissivelylicensed python package for analyzing and visualizing volumetric data. yt supports structured...

tsfresh
 Referenced in 4 articles
[sw28448]
 Scalable Hypothesis tests (tsfresh – A Python package). Time series feature engineering is a timeconsuming ... meaningful features from time series. The Python package tsfresh (Time Series FeatuRe Extraction on basis...

Kwant
 Referenced in 5 articles
[sw19547]
 Kwant is a free (open source) Python package for numerical calculations on tightbinding models ... packages. Instead, one writes short programs in the powerful yet easytolearn Python language...

h5py
 Referenced in 7 articles
[sw14817]
 h5py – HDF5 for python. The h5py package is a Pythonic interface to the HDF5 binary...

PyTransport
 Referenced in 5 articles
[sw26567]
 PyTransport: A Python package for the calculation of inflationary correlation functions. PyTransport constitutes a straightforward ... code written in C++ together with Python scripts which automatically edit, compile...

ForwardDiff
 Referenced in 11 articles
[sw16106]
 Julia. We present ForwardDiff, a Julia package for forwardmode automatic differentiation (AD) featuring performance ... other popular highlevel languages such as Python and MATLAB, ForwardDiff takes advantage of just ... reversemode implementation from the Pythonbased autograd package. We also illustrate how ForwardDiff...

F2PY
 Referenced in 31 articles
[sw04610]
 order of multidimensional Fortran and Numerical Python (i.e. C) arrays. In addition, F2PY ... NumPy package that provides fast multidimensional array language facility to Python...

geomstats
 Referenced in 3 articles
[sw24373]
 geomstats: a Python Package for Riemannian Geometry in Machine Learning. We introduce geomstats, a python...

DeBaCl
 Referenced in 3 articles
[sw23572]
 DeBaCl: A Python Package for Interactive DEnsityBAsed CLustering. The level set tree approach ... complex and highdimensional data. Several R packages exist for level set tree estimation ... trees, we have written the Python package DeBaCl for DEnsityBAsed CLustering. In this article...