• Brian

  • Referenced in 19 articles [sw23588]
  • simulator for spiking neural networks in python. ”Brian” is a new simulator for spiking neural ... networks, written in Python (http://brian. di.ens.fr). It is an intuitive and highly flexible tool ... arbitrary differential equations in ordinary mathematical notation. Python scientific libraries can also be used...
  • Regina

  • Referenced in 30 articles [sw04862]
  • includes a graphical user interface and Python bindings, and also supports angle structures, census enumeration...
  • py-junctions

  • Referenced in 30 articles [sw29153]
  • python package which, together with Sage, performs Lie algebra computations using string junctions. py-junctions...
  • STEPS

  • Referenced in 18 articles [sw17866]
  • Simulating Complex Reaction-Diffusion Systems with Python. We describe how the use of the Python ... these problems by tightly integrating STEPS with Python, using SWIG to expose our existing simulation...
  • FiPy

  • Referenced in 16 articles [sw10791]
  • FiPy: A Finite Volume PDE Solver Using Python. FiPy is an object oriented, partial differential ... equation (PDE) solver, written in Python, based on a standard finite volume (FV) approach ... approach, combining the FV method and Python, provides a tool that is extensible, powerful ... freely available. A significant advantage to Python is the existing suite of tools for array...
  • PyAMG

  • Referenced in 28 articles [sw12709]
  • Algebraic Multigrid (AMG) solvers with a convenient Python interface...
  • Apache Spark

  • Referenced in 28 articles [sw28418]
  • provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that...
  • PySP

  • Referenced in 17 articles [sw04921]
  • PySP: modeling and solving stochastic programs in Python Although stochastic programming is a powerful tool ... part of the Coopr open-source Python repository for optimization; the latter is distributed ... combination of a high-level programming language (Python) and the embedding of the base deterministic...
  • PyPI

  • Referenced in 17 articles [sw20220]
  • PyPI - the Python Package Index. The Python Package Index is a repository of software ... Python programming language. There are currently 108892 packages here. To contact the PyPI admins, please...
  • Numba

  • Referenced in 14 articles [sw21554]
  • Numba: a LLVM-based Python JIT compiler. Numba gives you the power to speed ... with high performance functions written directly in Python. With a few annotations, array-oriented ... math-heavy Python code can be just-in-time compiled to native machine instructions, similar ... Fortran, without having to switch languages or Python interpreters. Numba works by generating optimized machine...
  • GPy

  • Referenced in 19 articles [sw14302]
  • Gaussian Process (GP) framework written in python, from the Sheffield machine learning group. Gaussian processes ... learning algorithms. In GPy, we’ve used python to implement a range of machine learning...
  • Biopython

  • Referenced in 15 articles [sw07357]
  • Biopython: freely available Python tools for computational molecular biology and bioinformatics. Biopython ... available tools for biological computation written in Python by an international team of developers ... distributed collaborative effort to develop Python libraries and applications which address the needs of current...
  • Orange

  • Referenced in 15 articles [sw11818]
  • Orange: data mining toolbox in Python. Orange is a machine learning and data mining suite ... data analysis through Python scripting and visual programming. Here we report on the scripting part ... user write simple and clear scripts in Python, which build upon C$++$ implementations of computationally...
  • emcee

  • Referenced in 23 articles [sw20217]
  • Hammer. We introduce a stable, well tested Python implementation of the affine-invariant ensemble sampler...
  • Mayavi

  • Referenced in 22 articles [sw06797]
  • visualization of data, with seamless integration with Python scientific libraries...
  • Pyclaw

  • Referenced in 13 articles [sw06504]
  • largest supercomputers. This is achieved by using Python for most of the code while employing ... kernels for computationally intensive routines, and using Python bindings to interface with a parallel computing ... software described here is PyClaw, a Python-based structured grid solver for general systems...
  • PyCUDA

  • Referenced in 15 articles [sw09005]
  • PyCUDA gives you easy, Pythonic access to Nvidia‘s CUDA parallel computation API. Several wrappers ... CUDA errors are automatically translated into Python exceptions. Speed. PyCUDA’s base layer is written...
  • trueskill

  • Referenced in 21 articles [sw12352]
  • Doug Zongker and Heungsub Lee for their python implementations of the algorithm...
  • scikit-image

  • Referenced in 21 articles [sw12388]
  • Scikit-image: image processing in python. scikit-image is a collection of algorithms for image...