• Galaxy

  • Referenced in 12 articles [sw16927]
  • Galaxy: A platform for interactive large-scale genome...
  • FastQC

  • Referenced in 5 articles [sw16946]
  • FastQC: A quality control tool for high throughput...
  • Oases

  • Referenced in 3 articles [sw17027]
  • Oases: robust de novo RNA-seq assembly...
  • SOAPdenovo

  • Referenced in 8 articles [sw17028]
  • SOAP: Short Oligonucleotide Analysis Package. SOAPdenovo is a...
  • RNAmute

  • Referenced in 2 articles [sw17059]
  • The RNAmute web server for the mutational analysis...
  • RNAexinv

  • Referenced in 2 articles [sw17114]
  • RNAexinv: an extended inverse RNA folding from...
  • RNAfbinv

  • Referenced in 1 article [sw17115]
  • RNAfbinv: an interactive Java application for fragment-based...
  • RNAalifold

  • Referenced in 3 articles [sw17116]
  • RNAalifold: improved consensus structure prediction for RNA...
  • CONTRAfold

  • Referenced in 8 articles [sw17117]
  • For several decades, free energy minimization methods have...
  • Rnaz

  • Referenced in 3 articles [sw17118]
  • Rnaz 2.0: improved noncoding RNA detection. RNAz...
  • COFOLD

  • Referenced in 1 article [sw17121]
  • COFOLD: an RNA secondary structure prediction method...
  • PicXAA-R

  • Referenced in 1 article [sw17122]
  • PicXAA-R: efficient structural alignment of multiple RNA...
  • IPknot

  • Referenced in 3 articles [sw17124]
  • IPknot: fast and accurate prediction of RNA...
  • DAFS

  • Referenced in 1 article [sw17125]
  • DAFS: simultaneous aligning and folding of RNA...
  • PETfold

  • Referenced in 1 article [sw17126]
  • The PETfold and PETcofold web servers for intra...
  • PETcofold

  • Referenced in 3 articles [sw17127]
  • PETcofold: predicting conserved interactions and structures of two...
  • PPfold

  • Referenced in 1 article [sw17128]
  • PPfold 3.0: fast RNA secondary structure prediction...