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  • JASPAR
  • Referenced in 40 articles [sw18502]
  • potential transcription factor binding sites. The preferred models for representation of transcription factor binding specificity ... high‐quality, matrix‐based transcription factor binding site profiles for multicellular eukaryotes. The profiles were...

  • LAPACK
  • Referenced in 1626 articles [sw00503]
  • LAPACK is written in Fortran 90 and provides...

  • Maple
  • Referenced in 5040 articles [sw00545]
  • The result of over 30 years of cutting...

  • Mathematica
  • Referenced in 5883 articles [sw00554]
  • Almost any workflow involves computing results, and that...

  • Matlab
  • Referenced in 12074 articles [sw00558]
  • MATLAB® is a high-level language and interactive...

  • R
  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...

  • SageMath
  • Referenced in 1620 articles [sw00825]
  • Sage (SageMath) is free, open-source math software...

  • SINGULAR
  • Referenced in 1373 articles [sw00866]
  • SINGULAR is a Computer Algebra system (CAS) for...

  • LIBSVM
  • Referenced in 1088 articles [sw04879]
  • LIBSVM is a library for Support Vector Machines...

  • DLMF
  • Referenced in 2225 articles [sw04968]
  • NIST digital library of mathematical functions. The National...

  • fastDNAml
  • Referenced in 92 articles [sw06651]
  • fastDNAml is a program for estimating maximum likelihood...

  • PHYLIP
  • Referenced in 97 articles [sw07694]
  • PHYLIP is a free package of programs for...

  • Footprinter
  • Referenced in 10 articles [sw09003]
  • FootPrinter: a program designed for phylogenetic footprinting. Phylogenetic...

  • BioNetGen
  • Referenced in 53 articles [sw09072]
  • BioNetGen: software for rule-based modeling of signal...

  • DIALIGN
  • Referenced in 33 articles [sw12015]
  • DIALIGN: multiple DNA and protein sequence alignment at...

  • ClustalW
  • Referenced in 133 articles [sw12016]
  • CLUSTAL W: improving the sensitivity of progressive multiple...

  • LAGAN
  • Referenced in 17 articles [sw13192]
  • The Lagan Tookit is a set of alignment...

  • MUSCLE
  • Referenced in 71 articles [sw13193]
  • Muscle: multiple sequence alignment with high accuracy and...