• iLoc-Euk

  • Referenced in 37 articles [sw22434]
  • iLoc-Euk may become a useful bioinformatics tool for Molecular Cell Biology, Proteomics, System Biology...
  • Taverna

  • Referenced in 44 articles [sw08764]
  • Taverna: a tool for the composition and enactment of bioinformatics workflows. Motivation: In silico experiments ... bioinformatics involve the co-ordinated use of computational tools and information repositories. A growing number ... access in the form of Web services. Bioinformatics scientists will need to orchestrate these ... developed a tool for the composition and enactment of bioinformatics workflows for the life sciences...
  • Reactome

  • Referenced in 24 articles [sw14952]
  • goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway...
  • iDNA6mA-PseKNC

  • Referenced in 21 articles [sw27663]
  • experiments alone. Unfortunately, so far, no bioinformatics tool is available to do so. To fill...
  • iLoc-Plant

  • Referenced in 18 articles [sw22419]
  • iLoc-Plant may become a useful bioinformatics tool for Molecular Cell Biology, Proteomics, Systems Biology...
  • iPhos-PseEvo

  • Referenced in 17 articles [sw23953]
  • knowledge, so far no high throughput bioinformatics tool whatsoever has been developed to address such...
  • iProt-Sub

  • Referenced in 14 articles [sw27604]
  • have developed iProt-Sub, a powerful bioinformatics tool for the accurate prediction of protease-specific...
  • iRNA-2methyl

  • Referenced in 14 articles [sw24530]
  • 2methyl will become a very useful bioinformatics tool for medicinal chemistry, helping to design effective...
  • iEnhancer-EL

  • Referenced in 11 articles [sw27668]
  • controlling gene expression. Although some bioinformatics tools were developed, they are limited in discriminating enhancers...
  • GEOquery

  • Referenced in 9 articles [sw17285]
  • technology has become a standard molecular biology tool. Experimental data have been generated ... developed by the National Center for Bioinformatics (NCBI) at the National Institutes of Health ... analysis and comprehension of genomic data. The tools contained in the BioConductor project represent many ... using novel and rigorous statistical and bioinformatic tools. Facilitating analyses and meta-analyses of microarray...
  • GOTM

  • Referenced in 9 articles [sw13869]
  • that are difficult to analyze directly. Bioinformatics tools are needed to interpret the functional information...
  • iLoc-lncRNA

  • Referenced in 8 articles [sw30465]
  • Results: We developed a sequence-based bioinformatics tool called ‘iLoc-lncRNA’ to predict the subcellular...
  • ELM

  • Referenced in 8 articles [sw17021]
  • aiming to fill the void in bioinformatics tools. Sequence comparisons with short motifs are difficult...
  • Biopython

  • Referenced in 16 articles [sw07357]
  • Biopython: freely available Python tools for computational molecular biology and bioinformatics. Biopython ... freely available tools for biological computation written in Python by an international team of developers ... needs of current and future work in bioinformatics. The source code is made available under...
  • APCluster

  • Referenced in 104 articles [sw11002]
  • package is in no way restricted to bioinformatics applications. It is as generally applicable ... propagation, exemplar-based agglomerative clustering, and various tools for visual analysis of clustering results...
  • PSNO

  • Referenced in 6 articles [sw27678]
  • development. In this paper, a new bioinformatics tool, named PSNO, is proposed to identify SNOs...
  • Quokka

  • Referenced in 5 articles [sw27666]
  • Quokka: a comprehensive tool for rapid and accurate prediction of kinase family-specific phosphorylation sites ... work, we present Quokka, a novel bioinformatics tool that allows users to rapidly and accurately...
  • InterProScan

  • Referenced in 17 articles [sw17336]
  • Apweiler (2001) Bioinformatics, 17, 847–848] is a tool that combines different protein signature recognition...
  • LncDisease

  • Referenced in 2 articles [sw34250]
  • LncDisease: a sequence based bioinformatics tool for predicting lncRNA-disease associations. LncRNAs represent a large ... urgent need to develop bioinformatics tools as to gain insight into lncRNAs. This study developed...
  • Pse-in-One

  • Referenced in 41 articles [sw22407]
  • developed to address this problem, all these tools, however, can only handle one type ... analysis methods for various tasks in bioinformatics and system biology. It is anticipated that ... server will become a very useful tool in computational proteomics, genomics, as well as biological...