• SIMBio

  • Referenced in 1 article [sw34238]
  • colorful motifs in vertex colored biological networks. Motifs can be topological or not and gaps...
  • Matlab

  • Referenced in 12074 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...
  • CUDA

  • Referenced in 1185 articles [sw03258]
  • The NVIDIA® CUDA® Toolkit provides a comprehensive development...
  • Pajek

  • Referenced in 133 articles [sw03707]
  • Pajek -- analysis and visualization of large networks. Pajek...
  • UCI-ml

  • Referenced in 3041 articles [sw04074]
  • UC Irvine Machine Learning Repository. We currently maintain...
  • ARPACK

  • Referenced in 783 articles [sw04218]
  • ARPACK is a collection of Fortran77 subroutines designed...
  • LIBSVM

  • Referenced in 1088 articles [sw04879]
  • LIBSVM is a library for Support Vector Machines...
  • MPI

  • Referenced in 494 articles [sw06496]
  • Automatic differentiation through the use of hyper-dual...
  • MetaCyc

  • Referenced in 28 articles [sw08243]
  • MetaCyc is a database of nonredundant, experimentally elucidated...
  • AFNI

  • Referenced in 22 articles [sw09076]
  • AFNI: Software for Analysis and Visualization of Functional...
  • Gephi

  • Referenced in 45 articles [sw12110]
  • Gephi: An Open Source Software for Exploring and...
  • QNet

  • Referenced in 10 articles [sw13845]
  • QNet: A Tool for Querying Protein Interaction Networks...
  • KEGG

  • Referenced in 252 articles [sw13866]
  • KEGG: Kyoto Encyclopedia of Genes and Genomes. KEGG...
  • GitHub

  • Referenced in 1503 articles [sw23170]
  • GitHub (originally known as Logical Awesome LLC)[3...
  • FANMOD

  • Referenced in 13 articles [sw26134]
  • FANMOD: a tool for fast network motif detection...
  • Kavosh

  • Referenced in 8 articles [sw29733]
  • Kavosh: a new algorithm for finding network motifs...
  • GraMoFoNe

  • Referenced in 3 articles [sw34237]
  • GraMoFoNe, a Plugin for Cytoscape. GraMoFoNe (Graph Motif...