
spatstat
 Referenced in 122 articles
[sw04429]
 empty space statistics, Fry plots, pair correlation function, kernel smoothed intensity, relative risk estimation with ... crossvalidated bandwidth selection, mark correlation functions, segregation indices, mark dependence diagnostics etc. Point process...

PMA
 Referenced in 95 articles
[sw19126]
 sparse principal components analysis, and sparse canonical correlation analysis, described in the following papers ... applications to sparse principal components and canonical correlation analysis. Biostatistics ... Tibshirani (2009) Extensions of sparse canonical correlation analysis, with applications to genomic data. Statistical Applications...

nlmdl
 Referenced in 112 articles
[sw27811]
 correct variance estimates for heteroskedasticity and/or serial correlation. For simultaneous nonlinear systems, possibly in implicit...

rms
 Referenced in 80 articles
[sw04532]
 generalized least squares for serially or spatially correlated observations, generalized linear models, and quantile regression...

MIXED
 Referenced in 65 articles
[sw06480]
 repeated in time, space or both. Correlation among measurements made on the same subject...

OSCAR
 Referenced in 44 articles
[sw03026]
 large number of predictors with possibly high correlations, such as gene expression data. In this ... yields exact equality of some coefficients, encouraging correlated predictors that have a similar effect...

CATHARE
 Referenced in 43 articles
[sw09025]
 analysed. Having regard for some development principles, correlations are established on the basis of experimental ... laws are then developed. Wall heat transfer correlations then have to be fixed. All these...

Cytoscape
 Referenced in 59 articles
[sw09080]
 surveyed, including a search for interaction pathways correlating with changes in gene expression, a study...

RICPAC
 Referenced in 58 articles
[sw15253]
 with respect to inversion. Crossweighting or correlated noise is handled directly. Both systemtheoretic...

CreditRisk+
 Referenced in 40 articles
[sw31697]
 cause the incidence of defaults to be correlated, even though there is no causal link ... sector analysis rather than using default correlations as explicit inputs into the model. Mathematical techniques...

geepack
 Referenced in 38 articles
[sw07119]
 solver for parameters in mean, scale, and correlation structures, through mean link, scale link ... correlation link. Can also handle clustered categorical responses...

RegulonDB
 Referenced in 48 articles
[sw25948]
 data can be accessed through overviews of correlations about gene regulation. RegulonDB associated original literature...

CMAR
 Referenced in 47 articles
[sw28406]
 prunes rules effectively based on confidence, correlation and database coverage. The classification is performed based...

QSDP
 Referenced in 44 articles
[sw04726]
 software on QSDPs arising from the nearest correlation matrix and the Euclidean distance matrix completion...

AAindex
 Referenced in 44 articles
[sw26861]
 related entries in terms of the correlation coefficient, and the actual data. The database...

fdrtool
 Referenced in 29 articles
[sw08196]
 null models (pvalues, zscores, correlation coefficients, tscores). The proportion of null values ... majorant (LCM), for the halfnormal and correlation distributions, and for computing empirical higher criticism...

corpor
 Referenced in 21 articles
[sw09381]
 corpcor: Efficient Estimation of Covariance and (Partial) Correlation. This package implements a JamesSteintype ... matrix, with separate shrinkage for variances and correlations. The details of the method are explained ... package also provides shrinkage estimators for partial correlations and partial variances. The inverse ... covariance and correlation matrix can be efficiently computed, as well as any arbitrary power...

frailtypack
 Referenced in 38 articles
[sw06070]
 models for proportional hazard models with two correlated random effects (intercept random effect with random...

GAMESS
 Referenced in 34 articles
[sw03002]
 from RHF, ROHF, UHF, GVB, and MCSCF. Correlation corrections to these SCF wavefunctions include Configuration...

Herwig++
 Referenced in 32 articles
[sw10350]
 using matrix elements, where possible including spin correlations and offshell effects...