• CDFCOR

  • Referenced in 4 articles [sw05003]
  • approximation to finite set of data. differential correction algorithm to compute a best uniform generalized...
  • FISHPAK

  • Referenced in 89 articles [sw08012]
  • finite difference approximations to separable elliptic Partial Differential Equations (PDEs). These include Helmholtz equations ... equations. The solvers use the cyclic reduction algorithm. When the problem is singular, a least ... demonstration on your computer that you can correctly produce FISHPACK executables. The FISHPACK library...
  • DAEPACK

  • Referenced in 16 articles [sw12958]
  • state-of-the art state event location algorithms to be applied to general FORTRAN models ... parametric sensitivity calculations can be performed correctly discontinuity locking), and component for determining the analytical ... derivatives of the original model using automatic differentiation (AD) (automatic differentiation...
  • LAMG

  • Referenced in 22 articles [sw06551]
  • flows; electrical resistor circuits; and elliptic partial differential equations discretized on unstructured grids with finite ... phase using multigrid cycles. General graphs pose algorithmic challenges not encountered in traditional multigrid applications ... proximity measure (the affinity), and an energy correction of coarse-level systems. This results...
  • RESINVM3D

  • Referenced in 9 articles [sw12866]
  • forward solution to the governing partial differential equation is efficiently computed using a second-order ... coupled with a preconditioned, biconjugate, stabilized gradient algorithm. Using the analytical solution to a potential ... forward solution and, subsequently, develop a source correction factor that reduces forward modeling errors associated...
  • *NL*

  • Referenced in 1 article [sw19078]
  • basic ideas on nonlinear modelling, algorithms, and their correctness. Selected examples, prepared and annotated, support ... main fields considered are: evaluating functions, solving differential equations, fitting data, Fourier-analysis, used-defined...
  • QSPLINE

  • Referenced in 4 articles [sw07307]
  • with a convex quadratic spline (i.e., a differentiable convex piecewise quadratic function) as the objective ... programming problem, in which various unconstrained minimization algorithms can be used to find a stationary ... technique for computing Newton directions and a correction strategy for robust reduction of the convex...
  • MethylPurify

  • Referenced in 1 article [sw31457]
  • tumor DNA methylomes. We propose a statistical algorithm MethylPurify that uses regions with bisulfite reads ... from tumor samples alone. MethylPurify can identify differentially methylated regions (DMRs) from individual tumor methylome ... from cancer and normal cell lines, MethylPurify correctly inferred tumor purity and identified over...
  • FEMB

  • Referenced in 3 articles [sw19499]
  • cover a broad range of partial differential equations or to provide B-spline software ready ... possible lack of reliability of the numerical algorithms, which to some extent are based ... consequence, no guarantees for the correctness of the computed results can be given. In addition...
  • ALIF

  • Referenced in 2 articles [sw26214]
  • sheet model written in C. Algorithmic Differentiation (AD) has become a powerful tool to improve ... tool development, such as the correct treatment of the context code, which does not compute...
  • SUSY23

  • Referenced in 1 article [sw10788]
  • matrix element gives the total and differential cross sections, then unweighted events are generated. Sparticle ... into account in the decays of sparticles. Corrections of initial state radiation (ISR) are implemented ... second uses the parton shower algorithm called QEDPS. Parton shower and hadronization of the final...
  • MyriMatch

  • Referenced in 2 articles [sw31817]
  • random chance can be employed to separate correct matches from random ones. We evaluated this ... higher discrimination than either of these algorithms. When minimal peak filtering is employed, performance plummets ... search scorers that count matched peaks without differentiating them by intensity. This software and source...
  • BABAR

  • Referenced in 1 article [sw18997]
  • Batch Anti-Banana Algorithm in R (BABAR) algorithm and software package which uses cyclic loess ... simulated dataset, BABAR’s performance in identifying differentially expressed genes showed some benefits over standard ... simulated datasets to allow for the correct interpretation of these data, and is the ideal...
  • ANSYS

  • Referenced in 600 articles [sw00044]
  • ANSYS offers a comprehensive software suite that spans...
  • ATLAS

  • Referenced in 194 articles [sw00056]
  • This paper describes the Automatically Tuned Linear Algebra...
  • ACL2

  • Referenced in 262 articles [sw00060]
  • ACL2 is both a programming language in which...
  • AXIOM

  • Referenced in 168 articles [sw00063]
  • Axiom is a general purpose Computer Algebra system...
  • BARON

  • Referenced in 294 articles [sw00066]
  • BARON is a computational system for solving nonconvex...