• SOAPdenovo

  • Referenced in 8 articles [sw17028]
  • SOAP: Short Oligonucleotide Analysis Package. SOAPdenovo is a...
  • RNAmute

  • Referenced in 2 articles [sw17059]
  • The RNAmute web server for the mutational analysis...
  • RNAexinv

  • Referenced in 2 articles [sw17114]
  • RNAexinv: an extended inverse RNA folding from shape...
  • RNAfbinv

  • Referenced in 1 article [sw17115]
  • RNAfbinv: an interactive Java application for fragment-based...
  • RNAalifold

  • Referenced in 3 articles [sw17116]
  • RNAalifold: improved consensus structure prediction for RNA alignments...
  • CONTRAfold

  • Referenced in 8 articles [sw17117]
  • For several decades, free energy minimization methods have...
  • Rnaz

  • Referenced in 3 articles [sw17118]
  • Rnaz 2.0: improved noncoding RNA detection. RNAz is...
  • RactIP

  • Referenced in 2 articles [sw17120]
  • RactIP: fast and accurate prediction of RNA-RNA...
  • COFOLD

  • Referenced in 1 article [sw17121]
  • COFOLD: an RNA secondary structure prediction method that...
  • PicXAA-R

  • Referenced in 1 article [sw17122]
  • PicXAA-R: efficient structural alignment of multiple RNA...
  • IPknot

  • Referenced in 3 articles [sw17124]
  • IPknot: fast and accurate prediction of RNA secondary...
  • DAFS

  • Referenced in 1 article [sw17125]
  • DAFS: simultaneous aligning and folding of RNA sequences...
  • PETfold

  • Referenced in 1 article [sw17126]
  • The PETfold and PETcofold web servers for intra...
  • PETcofold

  • Referenced in 3 articles [sw17127]
  • PETcofold: predicting conserved interactions and structures of two...
  • PPfold

  • Referenced in 1 article [sw17128]
  • PPfold 3.0: fast RNA secondary structure prediction using...
  • RNAG

  • Referenced in 2 articles [sw17129]
  • RNAG: a new Gibbs sampler for predicting RNA...
  • RNAspa

  • Referenced in 2 articles [sw17131]
  • RNAspa: a shortest path approach for comparative prediction...