• CIXL2

  • Referenced in 19 articles [sw03302]
  • criteria, such as, multimodality, separability, regularity and epistasis. With this set of functions...
  • MDR

  • Referenced in 9 articles [sw22494]
  • other genetic variations (gene–gene interaction or epistasis) and environmental factors (gene–environment interaction). Detecting...
  • SNPassoc

  • Referenced in 4 articles [sw07122]
  • analysis of multiple SNPs (haplotype and epistasis analysis). Permutation test and related tests (sum statistic...
  • FastEpistasis

  • Referenced in 2 articles [sw27657]
  • software tool capable of computing tests of epistasis for a large number of SNP pairs ... efficient parallel extension to the PLINK epistasis module. It tests epistatic effects in the normal ... test for epistasis reduces to testing whether the interaction term is significantly different from zero...
  • Qxpak

  • Referenced in 3 articles [sw35126]
  • loci, multiple trait, infinitesimal genetic effects, imprinting, epistasis or sex linked loci can be fitted...
  • FAACOSE

  • Referenced in 1 article [sw34291]
  • colony optimization algorithm for detecting SNP epistasis. The epistasis is prevalent in the SNP interactions ... algorithm with multiobjective functions for detecting SNP epistasis in GWAS datasets. We compared our method ... proposed method outperforms other methods in epistasis detection, and the result of real dataset contributes...
  • eQTL epistasis

  • Referenced in 1 article [sw34290]
  • eQTL epistasis: detecting epistatic effects and inferring hierarchical relationships of genes in biological pathways. Results ... data. Then, we propose a novel generic epistasis model that provides a flexible solution...
  • CNVassoc

  • Referenced in 2 articles [sw19389]
  • models. Moreover, it is possible to perform epistasis studies with pairs of CNVs or imputed...
  • AntEpiSeeker

  • Referenced in 2 articles [sw34292]
  • powerful and efficient tool for detecting epistasis in a case-control design...
  • EPIQ

  • Referenced in 1 article [sw26695]
  • present an efficient algorithm for detecting epistasis in quantitative GWAS, achieving a substantial runtime speedup ... method in a tool named EPIQ (EPIstasis detection for Quantitative GWAS), and we show...
  • ReliefF

  • Referenced in 1 article [sw33465]
  • Epistasis Analysis Using ReliefF. Here we introduce the ReliefF machine learning algorithm and some ... extensions for detecting and characterizing epistasis in genetic association studies. We provide a general overview...
  • etma

  • Referenced in 1 article [sw35574]
  • package etma: Epistasis Test in Meta-Analysis. Traditional meta-regression based method has been developed ... purpose a new statistical method to detect epistasis using incomplete information summary, and have proven...
  • GLIDE

  • Referenced in 1 article [sw27656]
  • based linear regression for detection of epistasis. Due to recent advances in genotyping technologies, mapping...
  • GAMETES

  • Referenced in 1 article [sw28622]
  • using MDR, an algorithm designed to detect epistasis...
  • MACOED

  • Referenced in 1 article [sw34293]
  • objective ant colony optimization algorithm for SNP epistasis detection in Genome Wide Association Study. MACOED...
  • trigger

  • Referenced in 1 article [sw36166]
  • gene expression; (2) analyze multiple-locus linkage (epistasis) for gene expression; (3) quantify the proportion...
  • epistasis

  • Referenced in 0 articles [sw17801]
  • package epistasis. Detecting Epistatic Selection with Partially Observed Genotype Data. An efficient multi-core package...
  • cdd

  • Referenced in 110 articles [sw00114]
  • The program cdd+ (cdd, respectively) is a C...
  • Mathematica

  • Referenced in 5883 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 12074 articles [sw00558]
  • MATLAB® is a high-level language and interactive...