• AUTO

• Referenced in 877 articles [sw01059]
• AUTO can also do certain continuation and evolution computations for parabolic PDEs. It also includes...

• AUTO-86

• Referenced in 275 articles [sw04220]
• AUTO can also do certain continuation and evolution computations for parabolic PDEs. It also includes...

• CMA-ES

• Referenced in 102 articles [sw05063]
• stands for Covariance Matrix Adaptation Evolution Strategy. Evolution strategies (ES) are stochastic, derivative-free methods ... broadly based on the principle of biological evolution, namely the repeated interplay of variation ... better f-values are generated. In an evolution strategy, new candidate solutions are sampled according...

• JADE

• Referenced in 125 articles [sw24855]
• JADE: adaptive differential evolution with optional external archive. A new differential evolution (DE) algorithm, JADE...

• CAViaR

• Referenced in 136 articles [sw04424]
• value at risk (CAViaR) model specifies the evolution of the quantile over time using...

• PAES

• Referenced in 93 articles [sw04159]
• Pareto Archived Evolution Strategy (PAES) is a multiobjective optimizer which uses a simple ... local search evolution strategy. Nonetheless, it is capable of finding diverse solutions in the Pareto...

• RATH

• Referenced in 88 articles [sw00779]
• finding travelling solitary wave solutions to nonlinear evolution equations. A Maple package RATH which outputs ... solitary wave solutions of a given nonlinear evolution equation is presented. The effectiveness of RATH...

• Vador

• Referenced in 114 articles [sw06987]
• oriented Resolution. The Vlasov equation describes the evolution of a system of particles under...

• PYTHIA8

• Referenced in 107 articles [sw09347]
• coherent set of physics models for the evolution from a few-body hard process...

• CUTEst

• Referenced in 92 articles [sw11893]
• safe threads. We describe the most recent evolution of our constrained and unconstrained testing environment...

• iRSpot-PseDNC

• Referenced in 65 articles [sw22437]
• process. As a main driving force of evolution, recombination provides natural new combinations of genetic ... mechanism of recombination and the genome evolution process as well. So far, the recombination regions...

• ANTIGONE

• Referenced in 83 articles [sw09241]
• nonlinear global optimization framework. ANTIGONE is the evolution of the Global Mixed-Integer Quadratic Optimizer...

• CRACK

• Referenced in 57 articles [sw07754]
• systems is presented. The integrable polynomial vector evolution equations, quadratic Hamiltonians with ... Poisson structure and nonlocal 2+1-dimensional evolution equations are studied. An overview...

• DEoptim

• Referenced in 41 articles [sw08656]
• Package for Global Optimization by Differential Evolution. This article describes the R package DEoptim which ... implements the differential evolution algorithm for the global optimization of a real-valued function ... valued parameter vector. The implementation of differential evolution in DEoptim interfaces with C code...

• GRI-Mech 3.0

• Referenced in 62 articles [sw07056]
• another step in the continuing updating evolution of the mechanism. The optimization process is designed...

• ape

• Referenced in 55 articles [sw04569]
• package ape: Analyses of Phylogenetics and Evolution , ape provides functions for reading, writing, plotting...

• Memtype-2L

• Referenced in 39 articles [sw16472]
• membrane proteins and their types by incorporating evolution information through pse-PSSM. Given an uncharacterized ... MemType-2L is featured by incorporating the evolution information through representing the protein samples with...

• Seq-Gen

• Referenced in 30 articles [sw08310]
• Monte Carlo simulation of molecular sequence evolution along phylogenetic trees. Seq-Gen is a program ... that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using ... process. A range of models of molecular evolution are implemented including the general reversible model ... computationally tractable) models of molecular sequence evolution. The paper cited above contains details...

• DeMat

• Referenced in 36 articles [sw24853]
• DeMat: Differential Evolution (DE) in MATLAB. The latest MATLAB ® code from the book Differential Evolution...

• AUTO2000

• Referenced in 50 articles [sw04643]
• AUTO can also do certain continuation and evolution computations for parabolic PDEs. It also includes...