• TreeJuxtaposer

  • Referenced in 5 articles [sw18623]
  • tree comparison is needed, ranging from network management to call graph optimization to genealogy...
  • Rsampletrees

  • Referenced in 0 articles [sw19680]
  • Sampling of Gene Genealogies Conditional on Genetic Data. Sample ancestral trees conditional on phased...
  • Hybrid-Lambda

  • Referenced in 1 article [sw34310]
  • rooted species network or a rooted species tree under the coalescent process. The main feature ... standard Kingman coalescent process, which produces bifurcating genealogies, or two other Lambda coalescent processes, which...
  • Matlab

  • Referenced in 12074 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...
  • CRAN

  • Referenced in 456 articles [sw04351]
  • R is ‘GNU S’, a freely available language...
  • ggplot2

  • Referenced in 218 articles [sw04557]
  • R package ggplot2: An implementation of the Grammar...
  • igraph

  • Referenced in 150 articles [sw07066]
  • The igraph software package for complex network research...
  • Natalie

  • Referenced in 3 articles [sw08323]
  • natalie is a tool for pairwise global network...
  • IsoRank

  • Referenced in 10 articles [sw08324]
  • IsoRank: We describe an algorithm for global alignment...
  • IsoRankN

  • Referenced in 10 articles [sw08325]
  • IsoRankN: We describe IsoRankN (IsoRank-Nibble), a global...
  • Cytoscape

  • Referenced in 69 articles [sw09080]
  • Cytoscape: A Software Environment for Integrated Models of...
  • LAMARC

  • Referenced in 7 articles [sw11443]
  • Lamarc 2.0: maximum likelihood and Bayesian estimation of...
  • BEAST

  • Referenced in 44 articles [sw12588]
  • BEAST 2 is a cross-platform program for...
  • BEAUti

  • Referenced in 13 articles [sw12589]
  • Bayesian Evolutionary Analysis Utility (BEAUti). BEAUti is a...
  • dplyr

  • Referenced in 49 articles [sw13271]
  • R package dplyr: A Grammar of Data Manipulation...
  • PostgreSQL

  • Referenced in 70 articles [sw15935]
  • PostgreSQL is a powerful, open source object-relational...
  • BUCKy

  • Referenced in 6 articles [sw23619]
  • BUCKy: Gene tree/species tree reconciliation with Bayesian concordance...
  • KAMG

  • Referenced in 1 article [sw28363]
  • KAMG: A Tool for Converting Blood Ties and...