
SparseMatrix
 Referenced in 601 articles
[sw04629]
 statistics, power networks, and other networks and graphs). We provide software for accessing and managing...

LEDA
 Referenced in 259 articles
[sw00509]
 core computer science areas  data structures, graph and network algorithms, and computational geometry  LEDA...

Graphs
 Referenced in 104 articles
[sw12277]
 first presented with a network (graph). A socalled preprocessing algorithm may compute certain information ... many applications in areas such as transportation, networking, and social science, this problem has been ... compact routing and distance labeling schemes in networking and distributed computing and for metric embeddings ... practical significance such as planar graphs and complex networks...

Brain Connectivity Toolbox
 Referenced in 64 articles
[sw26516]
 MATLAB toolbox for complexnetwork (graph) analysis of structural and functional brainconnectivity data sets...

igraph
 Referenced in 142 articles
[sw07066]
 igraph software package for complex network research. igraph is a free software package for creating ... manipulating undirected and directed graphs. It includes ... implementations for classic graph theory problems like minimum spanning trees and network flow, and also ... implements algorithms for some recent network analysis methods, like community structure search. The efficient implementation...

SNAP
 Referenced in 36 articles
[sw04184]
 analysis and manipulation of large networks. Graphs consists of nodes and directed/undirected/multiple edges between ... graph nodes. Networks are graphs with data on nodes and/or edges of the network ... performance and compact graph representation. It easily scales to massive networks with hundreds of millions ... edges and attributes in a graph or a network can be changed dynamically during...

Graphviz
 Referenced in 80 articles
[sw01283]
 structural information as diagrams of abstract graphs and networks. It has important applications in networking...

KronFit
 Referenced in 36 articles
[sw20428]
 Kronecker graphs: an approach to modeling networks. How can we generate realistic networks? In addition ... First, we show that Kronecker graphs naturally obey common network properties. In fact, we rigorously ... fitting the Kronecker graph generation model to large real networks. A naive approach to fitting ... gain insights about the network structure, and the resulting synthetic graphs can be used...

LEMON
 Referenced in 37 articles
[sw05043]
 efficient implementations of graph and network algorithms and related data structures. The basic design concepts ... with similar software packages, namely BGL (Boost Graph Library) and LEDA. LEMON turned...

Pregel
 Referenced in 28 articles
[sw13416]
 Standard examples include the Web graph and various social networks. The scale of these graphs...

sna
 Referenced in 17 articles
[sw07318]
 tools for social network analysis, including node and graphlevel indices, structural distance ... covariance methods, structural equivalence detection, network regression, random graph generation, and 2D/3D network visualization...

ergm
 Referenced in 46 articles
[sw06777]
 analyze and simulate networks based on exponentialfamily random graph models (ERGM). ”ergm...

InterViewer
 Referenced in 28 articles
[sw00443]
 From the perspective of graph drawing, a protein interaction network is challenging because ... crossings and because it is a disconnected graph consisting of many connected components with nodes ... drawing and exploring proteinprotein interaction networks in threedimensional space. Unique features of INTERVIEWER...

JOSTLE
 Referenced in 33 articles
[sw04985]
 then using stateoftheart graph partitioning techniques. The code is extremely fast ... available under the name of NetWorks...

TensorFlow
 Referenced in 240 articles
[sw15170]
 graph represent mathematical operations, while the graph edges represent the multidimensional data arrays (tensors) communicated ... conducting machine learning and deep neural networks research, but the system is general enough...

JUNG
 Referenced in 10 articles
[sw12112]
 that can be represented as a graph or network. It is written in Java, which ... their relations, such as directed and undirected graphs, multimodal graphs, graphs with parallel edges ... number of algorithms from graph theory, data mining, and social network analysis, such as routines ... decomposition, optimization, random graph generation, statistical analysis, and calculation of network distances, flows, and importance...

Gephi
 Referenced in 36 articles
[sw12110]
 kinds of networks and complex systems, dynamic and hierarchical graphs. Runs on Windows, Linux...

netmeta
 Referenced in 7 articles
[sw17232]
 dx.doi.org/10.1186/s1287401500608”>doi:10.1186/s1287401500608>;  automated drawing of network graphs described in Rücker & Schwarzer (2016) <

Lamatto
 Referenced in 11 articles
[sw06943]
 problems especially on (but not limited to) networks. Lamatto++ is completely written ... with extendable data structures to handle graphs and networks and provides automatic unit conversion...