• CGAL

  • Referenced in 348 articles [sw00118]
  • ellipsoid of points, principal component analysis), and kinetic data structures. All these data structures...
  • CHEMKIN

  • Referenced in 200 articles [sw06684]
  • powerful tools for incorporating complex chemical kinetics into simulations of reacting flow. Using CHEMKIN, researchers...
  • VODE

  • Referenced in 191 articles [sw01005]
  • dimensional versions of a diurnal kinetics-transport problem. The dimensions are between...
  • Chemotaxis

  • Referenced in 164 articles [sw07009]
  • approximation of PDEs models (parabolic, hyperbolic and kinetic models...
  • Bio-PEPA

  • Referenced in 102 articles [sw01361]
  • suchas stoichiometry and the use of general kinetic laws. Bio-PEPA may be seen...
  • APBS

  • Referenced in 87 articles [sw05766]
  • determine ligand-protein and protein-protein binding kinetics, implicit solvent molecular dynamics of biomolecules, solvation...
  • GRI-Mech 3.0

  • Referenced in 59 articles [sw07056]
  • process is designed to provide sound basic kinetics which also furnish the best combined modeling ... made in the categories of updating the kinetics with recent literature results, including some...
  • energy

  • Referenced in 60 articles [sw08072]
  • explore the notion of potential and kinetic energy of goodness...
  • GYSELA

  • Referenced in 40 articles [sw17825]
  • drift-kinetic semi-Lagrangian 4D code for ion turbulence simulation. A new code is presented ... LAgragian (GYSELA) code, which solves 4D drift-kinetic equations for ion temperature gradient driven turbulence...
  • TRANSPORT

  • Referenced in 42 articles [sw08144]
  • This package uses the gas-phase chemical kinetics package CHEMKIN-III, and the TRANSPORT property...
  • BIOCHAM

  • Referenced in 40 articles [sw09927]
  • developing/correcting/completing/coupling models, including the inference of kinetic parameters in high dimension from temporal logic constraints...
  • NIMROD

  • Referenced in 26 articles [sw18086]
  • found in fusion experiments, Simulation particles for kinetic effects from a minority species of energetic ... ions, and Integro-differential methods for kinetic effects from free-streaming...
  • GEPASI

  • Referenced in 34 articles [sw07916]
  • modeling biochemical systems. It simulates the kinetics of systems of biochemical reactions and provides...
  • PREMIX

  • Referenced in 34 articles [sw27815]
  • program accounts for finite rate chemical kinetics and multicomponent molecular transport. After stating the appropriate...
  • BioModels

  • Referenced in 30 articles [sw13610]
  • free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. BioModels...
  • SENKIN

  • Referenced in 20 articles [sw12845]
  • program for predicting homogeneous gas phase chemical kinetics with sensitivity analysis. SENKIN is a Fortran ... finite-rate elementary chemical reactions, and performs kinetic sensitivity analysis with respect to the reaction...
  • Cantera

  • Referenced in 18 articles [sw15111]
  • Object-Oriented Software Toolkit for Chemical Kinetics, Thermodynamics, and Transport Processes. Cantera is a suite ... oriented software tools for problems involving chemical kinetics, thermodynamics, and/or transport processes. Cantera provides types...
  • MPSalsa

  • Referenced in 24 articles [sw06960]
  • equal emphasis on fluid flow and chemical kinetics modeling. In our research, we focus...
  • BioBayes

  • Referenced in 24 articles [sw08082]
  • degree of uncertainty about the values of kinetic parameters, about the general structure...
  • E-CELL

  • Referenced in 20 articles [sw07917]
  • rules of the developed cell model with kinetic parameters can be obtained...