• IdCoefs

  • Referenced in 2 articles [sw34166]
  • computation of identity coefficients and generalized kinship coefficients. Summary: Computing the probability of identity ... algorithm for efficiently computing all generalized kinship coefficients for n genes. The graphical description transforms ... structure referred to as the kinship graph. Availability: The algorithm is implemented...
  • PedKin

  • Referenced in 1 article [sw34169]
  • Efficient computation of the kinship coefficients. Results: This paper gives the fastest known algorithms ... computing the kinship coefficient of a set of individuals with a known pedigree, especially ... compute the appropriate inbreeding-adjusted kinship coefficients, which has not been addressed in literature ... pedigree on which to estimate the kinship coefficients of n‾√ n individuals of interest from...
  • ribd

  • Referenced in 1 article [sw34165]
  • algorithms for computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal ... lesser-known coefficients, including generalised kinship coefficients (Karigl (1981) ; Weeks and Lange...
  • KinInbcoef

  • Referenced in 1 article [sw10665]
  • KinInbcoef: Calculation of Kinship and Inbreeding Coefficients Based on Pedigree Information. KinInbcoef ... program that computes inbreeding and kinship coefficients for general pedigrees using the algorithm proposed...
  • SPAGEDi

  • Referenced in 2 articles [sw07534]
  • treated to estimate pairwise kinship or relationship coefficients between individuals (Hardy 2003 ME.pdf). The statistics ... individual level, pairwise kinship, relatedness and fraternity coefficients (with different estimators for each) as well ... Rousset’s distance between individuals and a kinship analogue based on allele size. Jackknife over...
  • optiSel

  • Referenced in 0 articles [sw19437]
  • pedigree or genotype information, and include kinships, kinships at native haplotype segments, and breed composition ... computing genetic contributions from ancestors, inbreeding coefficients, the native effective size, the native genome equivalent...
  • R

  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...
  • Pajek

  • Referenced in 133 articles [sw03707]
  • Pajek -- analysis and visualization of large networks. Pajek...
  • pls

  • Referenced in 29 articles [sw04365]
  • R package pls: Partial Least Squares and Principal...
  • PLINK

  • Referenced in 61 articles [sw04581]
  • PLINK is a free, open-source whole genome...
  • glmnet

  • Referenced in 461 articles [sw08159]
  • R package glmnet: Lasso and elastic-net regularized...
  • bnlearn

  • Referenced in 56 articles [sw08265]
  • R package bnlearn: Bayesian network structure learning, parameter...
  • spBayes

  • Referenced in 325 articles [sw10160]
  • spBayes: An R Package for Univariate and Multivariate...
  • CFC

  • Referenced in 1 article [sw10666]
  • CFC: a tool for monitoring genetic diversity. Monitoring...
  • WinGULF

  • Referenced in 14 articles [sw19224]
  • WinGULF: General User-friendly Linear and linear-Fractional...
  • GCTA

  • Referenced in 16 articles [sw23135]
  • GCTA: a tool for genome-wide complex trait...
  • kinship2

  • Referenced in 6 articles [sw24917]
  • R package kinship2: Pedigree Functions. Routines to handle...
  • Pedig

  • Referenced in 1 article [sw34167]
  • Pedig: a fortran package for pedigree analysis suited...