• MIXMAX

  • Referenced in 4 articles [sw29765]
  • unimodular matrix generators of pseudo-random numbers. We formulate the necessary and sufficient condition ... statistical properties. Finally, we construct three efficient algorithms for operations with the MIXMAX matrix which...
  • CCMpred

  • Referenced in 1 article [sw17014]
  • structures possible. The key was to apply statistical methods that can distinguish direct couplings between ... relying on regularized inversion of the covariance matrix or on pseudo-likelihood maximization (PLM). Although ... clearly higher precision, available tools are not sufficiently optimized and are written in interpreted languages...
  • COVAIN

  • Referenced in 1 article [sw10556]
  • biological interpretation of these ultracomplex data is sufficient to reveal the full information content ... Therefore a combination of univariate and multivariate statistics, network topology and biochemical pathway mapping analysis ... uploading data, data preprocessing, uni- and multivariate statistical analysis, Granger time-series analysis, pathway mapping ... algorithm to reconstruct a differential Jacobian matrix of two different metabolic conditions. The algorithm...
  • CoCoA

  • Referenced in 605 articles [sw00143]
  • CoCoA is a system for Computations in Commutative...
  • InterViewer

  • Referenced in 28 articles [sw00443]
  • InterViewer: Dynamic visualization of protein-protein interactions From...
  • LANCELOT

  • Referenced in 293 articles [sw00500]
  • LANCELOT. A Fortran package for large-scale nonlinear...
  • Macaulay2

  • Referenced in 1576 articles [sw00537]
  • Macaulay2 is a software system devoted to supporting...
  • Maple

  • Referenced in 4919 articles [sw00545]
  • The result of over 30 years of cutting...
  • Mathematica

  • Referenced in 5703 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 11496 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 7624 articles [sw00771]
  • R is a language and environment for statistical...
  • REDUCE

  • Referenced in 737 articles [sw00789]
  • REDUCE is an interactive system for general algebraic...
  • SINGULAR

  • Referenced in 1314 articles [sw00866]
  • SINGULAR is a Computer Algebra system (CAS) for...
  • MACSYMA

  • Referenced in 714 articles [sw01209]
  • Macsyma is a general purpose symbolic-numerical-graphical...
  • SNOPT

  • Referenced in 495 articles [sw02300]
  • SNOPT: An SQP algorithm for large-scale constrained...
  • CONOPT

  • Referenced in 162 articles [sw02791]
  • CONOPT is a generalized reduced-gradient (GRG) algorithm...
  • S-PLUS

  • Referenced in 563 articles [sw02892]
  • S-PLUS is a powerful environment for statistical...
  • NOMAD

  • Referenced in 82 articles [sw02916]
  • Algorithm 909: NOMAD: Nonlinear Optimization with the MADS...
  • OSCAR

  • Referenced in 44 articles [sw03026]
  • Simultaneous regression shrinkage, variable selection, and supervised clustering...
  • L-BFGS

  • Referenced in 693 articles [sw03229]
  • Algorithm 778: L-BFGS-B Fortran subroutines for...