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  • RedMD
  • Referenced in 1 article [sw32713]
  • perform molecular dynamics simulations in a microcanonical ensemble, with Berendsen and Langevin thermostats, and with ... used for code parallelization. The code is distributed under GNU public licence and available...

  • GradSamp
  • Referenced in 103 articles [sw05270]
  • A robust gradient sampling algorithm for nonsmooth, nonconvex...

  • BioProspector
  • Referenced in 29 articles [sw09375]
  • BioProspector: discovering conserved DNA motifs in upstream regulatory...

  • tsbridge
  • Referenced in 165 articles [sw12354]
  • tsbridge: Calculate normalising constants for Bayesian time series...

  • BN2DMD
  • Referenced in 1 article [sw16950]
  • Molecular dynamics implementation of BN2D or `Mercedes Benz...

  • CisModule
  • Referenced in 6 articles [sw35646]
  • CisModule: A Bayesian module sampler by hierachical mixture...