• FEXACT

  • Referenced in 14 articles [sw00281]
  • Algorithm 643 FEXACT: The computer code for Mehta...
  • R

  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...
  • STAR

  • Referenced in 12 articles [sw02515]
  • STAR: ultrafast universal RNA-seq aligner. Motivation: Accurate...
  • FactoMineR

  • Referenced in 45 articles [sw04573]
  • R package FactoMineR: Multivariate Exploratory Data Analysis and...
  • Soap

  • Referenced in 37 articles [sw08915]
  • SOAP: short oligonucleotide alignment program. We have developed...
  • Samtools

  • Referenced in 20 articles [sw14583]
  • Samtools is a suite of programs for interacting...
  • FastQC

  • Referenced in 5 articles [sw16946]
  • FastQC: A quality control tool for high throughput...
  • MEDIPS

  • Referenced in 2 articles [sw17294]
  • MEDIPS: genome-wide differential coverage analysis of sequencing...
  • BEDTools

  • Referenced in 11 articles [sw17302]
  • BEDTools: a flexible suite of utilities for comparing...
  • featureCounts

  • Referenced in 5 articles [sw17317]
  • featureCounts: an efficient general-purpose read summarization program...
  • WebGestalt

  • Referenced in 7 articles [sw17514]
  • WebGestalt: An integrated system for exploring gene sets...
  • g Profiler

  • Referenced in 3 articles [sw20148]
  • g:Profiler -- a web server for functional interpretation...
  • chequeR

  • Referenced in 1 article [sw20379]
  • R package chequeR used to generate enrichment statistics...
  • MMDiff

  • Referenced in 1 article [sw20380]
  • R / Bioconductor package MMDiff: Statistical Testing for ChIP...