
abSNP
 Referenced in 1 article
[sw33988]
 have uniquely mapped reads, they suffer in loci where the reads are multiply mapped ... exploiting the quality scores of multiply mapped reads carefully in order to make variant calls ... identify which repetitive copy a particular read is sampled from. par We demonstrate that ... highcoverage SNPs, even when multiply mapped...

Sniper
 Referenced in 1 article
[sw33991]
 Sniper: improved SNP discovery by multiply mapping deep sequenced reads. SNP (single nucleotide polymorphism) discovery...

Coq
 Referenced in 1784 articles
[sw00161]
 Coq is a formal proof management system. It...

R
 Referenced in 8359 articles
[sw00771]
 R is a language and environment for statistical...

TSPLIB
 Referenced in 661 articles
[sw00983]
 TSPLIB is a library of sample instances for...

STAR
 Referenced in 12 articles
[sw02515]
 STAR: ultrafast universal RNAseq aligner. Motivation: Accurate...

SDPT3
 Referenced in 609 articles
[sw04009]
 This software is designed to solve conic programming...

UCIml
 Referenced in 3041 articles
[sw04074]
 UC Irvine Machine Learning Repository. We currently maintain...

CPLEX
 Referenced in 2551 articles
[sw04082]
 IBM® ILOG® CPLEX® offers C, C++, Java, .NET...

PVM
 Referenced in 305 articles
[sw04273]
 PVM (Parallel Virtual Machine) is a software package...

NewtonLib
 Referenced in 265 articles
[sw04796]
 Numerical Mathematics  NewtonLib. Software repository for Peter Deuflhards...

LIBSVM
 Referenced in 1088 articles
[sw04879]
 LIBSVM is a library for Support Vector Machines...

MeatAxe
 Referenced in 65 articles
[sw04906]
 The MeatAxe  Computing with Modular Representations. The MeatAxe...

LBFGSB
 Referenced in 313 articles
[sw05142]
 Algorithm 778: LBFGSB Fortran subroutines for...

OEIS
 Referenced in 3387 articles
[sw07248]
 The OnLine Encyclopedia of Integer Sequence. The...

UNLocBoX
 Referenced in 278 articles
[sw07521]
 The UNLocboX is a matlab convex optimization toolbox...

SQOPT
 Referenced in 18 articles
[sw07860]
 User guide for SQOPT 7: Software for large...

glmnet
 Referenced in 461 articles
[sw08159]
 R package glmnet: Lasso and elasticnet regularized...

COLSYS
 Referenced in 245 articles
[sw10078]
 Algorithm 569: COLSYS: Collocation Software for BoundaryValue...

BayesDA
 Referenced in 1097 articles
[sw11008]
 BayesDA: Functions and Datasets for the book ”Bayesian...