• JADE

  • Referenced in 125 articles [sw24855]
  • improve optimization performance by implementing a new mutation strategy ”DE/current-to-pbest” with optional external archive...
  • CHARMM

  • Referenced in 112 articles [sw05953]
  • molecules. It performs free energy calculations of mutations and drug binding as well as conformational...
  • CMA-ES

  • Referenced in 100 articles [sw05063]
  • namely the repeated interplay of variation (via mutation and recombination) and selection: in each generation...
  • TRANSFAC

  • Referenced in 73 articles [sw17201]
  • modules: PathoDB provides data on pathologically relevant mutations in regulatory regions and transcription factor genes...
  • quivermutation

  • Referenced in 37 articles [sw13691]
  • Quiver mutation in Java: These java applets implement quiver mutation (and cluster mutation) as invented ... Fomin and A. Zelevinsky in 2000. Quiver mutation is related to a large number ... nodes) and arrows between the vertices. To mutate with respect to a vertex, click ... vertex. To adjust the picture after mutation, drag the vertices. Note that edges...
  • AAindex

  • Referenced in 44 articles [sw26861]
  • values and AAindex2 for the amino acid mutation matrix of 210 numerical values. Each entry...
  • Ginsim

  • Referenced in 28 articles [sw09090]
  • experimental perturbations, such as loss-of-function mutations or ectopically induced gene expression...
  • Pregel

  • Referenced in 28 articles [sw13416]
  • that of its outgoing edges or mutate graph topology. This vertex-centric approach is flexible...
  • 2D-MH

  • Referenced in 21 articles [sw19727]
  • protein sequences, (4) more sensitive for the mutation sites important for drug targeting...
  • CoulombHiggs

  • Referenced in 20 articles [sw16336]
  • basis vectors, study the effect of generalized mutations, and more. The third version 2.1, released...
  • AbYSS

  • Referenced in 19 articles [sw09881]
  • follows the scatter search structure but uses mutation and crossover operators from evolutionary algorithms. AbYSS...
  • avida

  • Referenced in 17 articles [sw17260]
  • strings of computer code subject to random mutations, adapting to a complex information-rich landscape...
  • muJava

  • Referenced in 9 articles [sw23770]
  • µJava (muJava) is a mutation system for Java programs. It automatically generates mutants for both ... traditional mutation testing and class-level mutation testing. µJava can test individual classes and packages ... limited basis to researchers in mutation analysis; please contact Offutt for more information...
  • PGAPack

  • Referenced in 16 articles [sw04922]
  • replacement. Multiple choices for SELECTION, CROSSOVER, and MUTATION operators Easy integration of hill-climbing heuristics...
  • GAPS

  • Referenced in 13 articles [sw02613]
  • finding the closest symmetric point. Adaptive mutation and crossover probabilities are used. The proposed...
  • Leon

  • Referenced in 10 articles [sw09159]
  • Scala, Leon supports imperative constructs such as mutations and loops, using a translation into recursive...
  • KaHIP

  • Referenced in 9 articles [sw19376]
  • that uses KaFFPa to provide combine and mutation operations, as well as KaBaPE which extends...
  • FoldX

  • Referenced in 9 articles [sw21771]
  • rapid evaluation of the effect of mutations on the stability, folding and dynamics of proteins...
  • GAHC

  • Referenced in 6 articles [sw02734]
  • different researchers, for example modifications to the mutation operator. These modifications usually change the overall ... presents a binary GA with a modified mutation operator, which is based on the well...
  • PLASQ

  • Referenced in 6 articles [sw18746]
  • largely driven by the acquisition of mutations. One class of such mutations is copy number...