• REDUCE

  • Referenced in 737 articles [sw00789]
  • polynomials and rational functions; substitutions and pattern matching in a wide variety of forms; automatic ... output of expressions in a variety of formats; facilities for generating optimized numerical programs from...
  • MNIST

  • Referenced in 155 articles [sw12859]
  • pattern recognition methods on real-world data while spending minimal efforts on preprocessing and formatting...
  • spatstat

  • Referenced in 122 articles [sw04429]
  • process models can be fitted to point pattern data using functions ppm, kppm, slrm similar ... include dependence on covariates, interpoint interaction, cluster formation and dependence on marks. Fitted models...
  • SuiteSparseQR

  • Referenced in 27 articles [sw07348]
  • found without requiring the formation of the pattern of ATA. Approximate rank-detection is performed...
  • biXid

  • Referenced in 9 articles [sw12667]
  • features for facilitating realistic conversions whose target formats are loosely in parallel but have many ... adopt XDuce-style regular expression patterns for describing and analyzing XML structures, (2) fully permit ... treating formats that do not have equivalent expressivenesses, and (3) allow non-linear pattern variables...
  • Turtle

  • Referenced in 6 articles [sw25696]
  • text form, with abbreviations for common usage patterns and datatypes. Turtle provides levels of compatibility ... Triples and Notation 3 formats as well as the triple pattern syntax of the SPARQL...
  • MEME

  • Referenced in 14 articles [sw15711]
  • works by searching for repeated, ungapped sequence patterns that occur in the DNA or protein ... matches to motifs encoded in several popular formats. By clicking on buttons in the MEME ... motifs and display the motifs in various formats. This article describes the freely accessible ... MEME effectively to find new sequence patterns in biological sequences and analyze their significance...
  • SELL_C_sigma

  • Referenced in 11 articles [sw11232]
  • However, the optimal sparse matrix data storage format is highly hardware-specific, which could become ... there is no structure in the sparsity pattern of the matrix. We suggest SELL ... Sliced ELLPACK, as a SIMD-friendly data format which combines long-standing ideas from general...
  • FlyExpress

  • Referenced in 1 article [sw30013]
  • tool for mining spatiotemporal expression patterns in a format readily accessible to the scientific community...
  • FRAGSTATS

  • Referenced in 16 articles [sw31496]
  • addition of cell-level metrics and surface pattern metrics, among other things. The current release ... model architecture, support for additional image formats, and a variety of sampling methods for analyzing...
  • WorkStream

  • Referenced in 5 articles [sw26345]
  • WorkStream -- a design pattern for multicore-enabled finite element computations. Many operations that need ... that can be output in visualization file formats all fall into this class of operations ... this realization, we identify a software design pattern that we call WorkStream and that...
  • MINRES-QLP

  • Referenced in 10 articles [sw11181]
  • FORTRAN 90 implementation illustrates a design pattern that allows users to make problem data known ... complex problems specified in Matrix Market format. While we focus here on a FORTRAN...
  • rcosmo

  • Referenced in 2 articles [sw29792]
  • formats and handling of three types of non-CMB data: continuous geographic, point pattern ... example data converted into the HEALPix format. The paper can serve as the first practical...
  • DMTL

  • Referenced in 3 articles [sw00213]
  • properties. The kind of pattern to be mined, the kind of mining approach ... kind of data types and formats to mine over are all specified as a list...
  • RONN

  • Referenced in 7 articles [sw16909]
  • recently developed ‘bio-basis function neural network’ pattern recognition algorithm to the detection of natively ... software and the database of disorder (XML format) can be directed to the corresponding author...
  • svcR

  • Referenced in 1 article [sw19768]
  • Pattern Discovery. We present a new R package which takes a numerical matrix format...
  • MAANOVA

  • Referenced in 4 articles [sw08357]
  • discovery rates, produce graphical summaries of expression patterns, and perform cluster analysis with bootstrapping ... microarray analysis in an open-ended format within flexible computing environments. MAANOVA functions...
  • MEGA4

  • Referenced in 6 articles [sw07695]
  • generate captions, written in figure legend format, in order to provide natural language descriptions ... incorporating rate variation among sites and substitution pattern heterogeneities among lineages. This MCL method also...
  • LOGML

  • Referenced in 3 articles [sw02473]
  • generate web-log reports in LOGML format for a web site from web log files ... mining algorithms (for extracting increasingly complex frequent patterns) can be specified and implemented efficiently using...
  • gridSVG

  • Referenced in 1 article [sw25102]
  • graphics drawn with package grid to SVG format. Additional functions provide access to SVG features ... filters, masks, clipping paths, and gradient and pattern fills...