• PROFIL/BIAS

  • Referenced in 125 articles [sw00733]
  • PROFIL (Programmer’s Runtime Optimized Fast Interval Library) is a C++ class library supporting ... matrices of these types, and complex numbers. PROFIL is based on BIAS (Basic Interval Arithmetic...
  • Valgrind

  • Referenced in 55 articles [sw04420]
  • many memory management and threading bugs, and profile your programs in detail. You can also ... error detectors, a cache and branch-prediction profiler, a call-graph generating cache and branch ... prediction profiler, and a heap profiler. It also includes three experimental tools: a heap/stack/global array ... overrun detector, a second heap profiler that examines how heap blocks are used...
  • Pellet

  • Referenced in 92 articles [sw07019]
  • essential. Pellet includes support for OWL 2 profiles including OWL 2 EL. It incorporates optimizations...
  • TRANSFAC

  • Referenced in 73 articles [sw17201]
  • their genomic binding sites and DNA-binding profiles (http://transfac.gbf.de/TRANSFAC/ ). Its content has been...
  • MUSCLE

  • Referenced in 70 articles [sw13193]
  • kmer counting, progressive alignment using a new profile function we call the log‐expectation score...
  • JASPAR

  • Referenced in 39 articles [sw18502]
  • access database for eukaryotic transcription factor binding profiles. The analysis of regulatory regions in genome ... quality, matrix‐based transcription factor binding site profiles for multicellular eukaryotes. The profiles were derived...
  • Cytoscape

  • Referenced in 61 articles [sw09080]
  • visually integrate the network with expression profiles, phenotypes, and other molecular states; and to link...
  • Nike2D

  • Referenced in 59 articles [sw12115]
  • used for the spatial discretization, and profile (bandwidth) minimization is optional...
  • BSPlib

  • Referenced in 41 articles [sw03374]
  • performance tuning using BSP. A call-graph profiling tool has been designed and implemented ... improvement. A unique feature of this profiler is that it uses the bulk synchronous parallel...
  • PROSITE

  • Referenced in 35 articles [sw17326]
  • PROSITE: a documented database using patterns and profiles as motif. Among the various databases dedicated ... motifs that are described as patterns or profiles, and linked to documentation briefly describing...
  • StirMark

  • Referenced in 34 articles [sw19164]
  • automated independent public service with extended evaluation profiles to evaluate quickly watermarking libraries. This ... evaluated using an evaluation profile (basically list of tests and images) you specify. During...
  • SMIL

  • Referenced in 41 articles [sw03378]
  • modules. Define new SMIL 3.0 Mobile Profiles incorporating features useful within the industry. SMIL...
  • refund

  • Referenced in 40 articles [sw07434]
  • counts and to dense white-matter tract profiles. Code for the analyses and simulations...
  • MARTE

  • Referenced in 21 articles [sw21826]
  • Embedded systems. This specification of a UML® profile adds capabilities to UML for model-driven ... Systems (RTES). This extension, called the UML profile for MARTE (in short MARTE), provides support ... specification, design, and verification/validation stages. This new profile is intended to replace the existing ... Profile for Schedulability, Performance and Time (formal/03-09-01). MARTE consists in defining foundations for model-based...
  • Mosel

  • Referenced in 36 articles [sw04911]
  • tools such as the Mosel debugger and profiler. The Mosel libraries provide the neccessary functionality...
  • PREMIX

  • Referenced in 34 articles [sw27815]
  • computer program that computes species and temperature profiles in steady-state burner-stabilized and freely...
  • Gaigen

  • Referenced in 33 articles [sw04958]
  • generate with it by using the provided profiler function. Benchmarks in a ray tracing application...
  • Rfam

  • Referenced in 32 articles [sw04637]
  • slightly more complicated relative of the profile hidden Markov models (HMMs) used by Pfam...
  • ARACNE

  • Referenced in 32 articles [sw17200]
  • ARACNE, a novel algorithm, using microarray expression profiles, specifically designed to scale...
  • Image Processing Toolbox

  • Referenced in 31 articles [sw13352]
  • high dynamic range, gigapixel resolution, embedded ICC profile, and tomographic. Visualization functions and apps...