
PSIBLAST
 Referenced in 148 articles
[sw17324]
 decreased substantially while enhancing their sensitivity to weak similarities. A new criterion for triggering ... many cases is much more sensitive to weak but biologically relevant sequence similarities. PSIBLAST...

UTA Plus
 Referenced in 131 articles
[sw16225]
 utility functions within limits given by a sensitivity analysis of the ordinal regression problem. There...

SIMPLIcity
 Referenced in 81 articles
[sw14893]
 SIMPLIcity: Semanticssensitive integrated matching for picture libraries. We present here SIMPLIcity (semanticssensitive integrated...

ClustalW
 Referenced in 105 articles
[sw12016]
 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positionspecific...

MMACBETH
 Referenced in 87 articles
[sw16199]
 involving qualitative value scores and weights; Interactive sensitivity and robustness analyses. MACBETH (Measuring Attractiveness...

impute
 Referenced in 80 articles
[sw14376]
 appears to provide a more robust and sensitive method for missing value estimation than SVDimpute...

AVISPA
 Referenced in 77 articles
[sw03172]
 automated validation of Internet securitysensitive protocols and applications. It provides a modular and expressive...

Stratego
 Referenced in 72 articles
[sw01259]
 dynamic rewrite rules for expressing contextsensitive transformations, thus supporting the development of transformation components...

TAMC
 Referenced in 71 articles
[sw07198]
 Typical applications are data assimilation, model tuning, sensitivity analysis, and determination of singular vectors...

ASA
 Referenced in 68 articles
[sw04736]
 annealing also permits adaptation to changing sensitivities in the multidimensional parameterspace. This annealing...

CVODES
 Referenced in 33 articles
[sw04946]
 form y’ = f(t,y,p) with sensitivity analysis capabilities (both forward and adjoint modes ... integration of the original ODEs, the sensitivity systems, or the adjoint system. Depending ... number of functional outputs, one of two sensitivity methods is more appropriate. The forward sensitivity ... result of which is the solution sensitivity. The gradient of any output function depending...

PostgreSQL
 Referenced in 63 articles
[sw15935]
 localeaware for sorting, casesensitivity, and formatting. It is highly scalable both...

DASPK 3.0
 Referenced in 34 articles
[sw04288]
 Software and algorithms for sensitivity analysis of largescale differential algebraic systems. The authors describe ... software package DASPK 3.0 for the sensitivity analysis of largescale differential algebraic equations. They ... outline the underlying algorithms for the sensitivity analysis and for the choice of consistent initial...

DAKOTA
 Referenced in 52 articles
[sw05202]
 Design Optimization,Parameter Estimation, Uncertainty Quantification, and Sensitivity Analysis, The Dakota (Design Analysis...

Rapide
 Referenced in 37 articles
[sw01249]
 eventbased execution model of distributed, timesensitive systems  the ”timed poset model.” Posets provide ... correctness and performance analysis of distributed timesensitive systems...

GRIMech 3.0
 Referenced in 50 articles
[sw07056]
 mechanism and target selection, and examining the sensitivity to the thermodynamics...

ROBPCA
 Referenced in 48 articles
[sw11592]
 data and hence is highly sensitive to outlying observations. Two robust approaches have been developed...

MUTERM
 Referenced in 34 articles
[sw10015]
 Tool for Proving Termination of ContextSensitive Rewriting. Restrictions of rewriting can eventually achieve termination ... rewrite sequences issued from every term. Contextsensitive rewriting (CSR) is an example of such...

PatternHunter
 Referenced in 26 articles
[sw20963]
 PatternHunter: faster and more sensitive homology search. MOTIVATION: Genomics and proteomics studies routinely depend ... homology search techniques: increasing seed size decreases sensitivity whereas decreasing seed size slows down computation ... uses a novel seed model for increased sensitivity and new hitprocessing techniques for significantly ... increased speed. At Blast levels of sensitivity, PatternHunter is able to find homologies between sequences...

ODESSA
 Referenced in 28 articles
[sw00647]
 ordinary differential equation solver with explicit simultaneous sensitivity analysis. ODESSA is a package of FORTRAN ... equations and the associated firstorder parametric sensitivity equations, yielding the ODE solution vector below ... firstorder sensitivity coefficients with respect to equation parameters below;. ODESSA is a modification...