
NAG
 Referenced in 374 articles
[sw00610]
 commercially available collection of numerical and statistical algorithms in the world. With over...

PSIBLAST
 Referenced in 217 articles
[sw17324]
 protein comparisons, a variety of definitional, algorithmic and statistical refinements described here permits the execution...

spBayes
 Referenced in 305 articles
[sw10160]
 available software for such algorithms. Here, we introduce a statistical software package, spBayes, built upon ... statistical computing platform that implements a generalized template encompassing a wide variety of Gaussian spatial ... multivariate pointreferenced data. We discuss the algorithms behind our package and illustrate...

BSDS
 Referenced in 166 articles
[sw14427]
 application to evaluating segmentation algorithms and measuring ecological statistics...

SsfPack
 Referenced in 64 articles
[sw09502]
 Statistical algorithms for models in state space using SsfPack 2. 2. The authors discuss ... document the algorithms of SsfPack 2.2. SsfPack is a suite of C routines for carrying ... computations involving the statistical analysis of univariate and multivariate models in state space form...

Scilab
 Referenced in 166 articles
[sw00834]
 Optimization: Algorithms to solve constrained and unconstrained continuous and discrete optimization problems. Statistics: Tools...

AS 307
 Referenced in 56 articles
[sw14162]
 algorithm can be extended to the computation of depth contours and bivariate sign test statistics...

MersenneTwister
 Referenced in 259 articles
[sw05367]
 also shown to be good. An algorithm is also given that checks the primitivity ... portable Ccode. It passed several stringent statistical tests, including diehard. Its speed is comparable ... merits are due to the efficient algorithms that are unique to polynomial calculations over...

GMRFLib
 Referenced in 265 articles
[sw06641]
 GMRFs in complex hierarchical models, in which statistical inference is only possible using Markov Chain ... computational aspects, construct fast and reliable algorithms for MCMC inference, and provide an online ... ideal tool for researchers and students in statistics, particularly biostatistics and spatial statistics, as well...

SuLQ
 Referenced in 120 articles
[sw11355]
 privacy: the SuLQ framework. We consider a statistical database in which a trusted administrator introduces ... component analysis, k means clustering, the Perceptron Algorithm, the ID3 algorithm ... apparently!) all algorithms that operate in the in the statistical query learning model...

Mplus
 Referenced in 322 articles
[sw06511]
 Mplus is a statistical modeling program that provides researchers with a flexible tool to analyze ... wide choice of models, estimators, and algorithms in a program that has an easy...

SPOT
 Referenced in 76 articles
[sw06347]
 tuning and understanding simulation and optimization algorithms. Modelbased investigations are common approaches in simulation ... strong need for sound statistical analysis of simulation and optimization algorithms. spot includes methods...

QUESO
 Referenced in 22 articles
[sw10555]
 Optimization. QUESO is a collection of statistical algorithms and programming constructs supporting research into...

ICALAB
 Referenced in 107 articles
[sw15047]
 efficient algorithms for ICA (independent component analysis) employing HOS (higher order statistics), BSS (blind source...

Infer.NET
 Referenced in 27 articles
[sw07886]
 stateoftheart messagepassing algorithms and statistical routines for performing Bayesian inference...

SparseMatrix
 Referenced in 601 articles
[sw04629]
 development and performance evaluation of sparse matrix algorithms. It allows for robust and repeatable experiments ... quantum chemistry, chemical process simulation, mathematics and statistics, power networks, and other networks and graphs...

TETRAD
 Referenced in 373 articles
[sw12177]
 intended to replace flexible statistical programming systems such as Matlab, Splus or R. Tetrad ... suite of principled search (”exploration,” ”discovery”) algorithms it providesfor example its ability to search...

Statistics Toolbox
 Referenced in 18 articles
[sw10157]
 Statistics Toolbox™ provides statistical and machine learning algorithms and tools for organizing, analyzing, and modeling ... random numbers for Monte Carlo simulations, use statistical plots for exploratory data analysis, and perform ... tests. For analyzing multidimensional data, Statistics Toolbox includes algorithms that let you identify key variables...

FAMT
 Referenced in 27 articles
[sw11123]
 estimated thanks to an EM algorithm. Adjusted tests statistics are derived, as well...

APCluster
 Referenced in 100 articles
[sw11002]
 algorithm available as Matlab code. Matlab, however, is relatively uncommon in bioinformatics. Instead, the statistical...