
shapes
 Referenced in 15 articles
[sw14500]
 package shapes: Statistical Shape Analysis. Routines for the statistical analysis of landmark shapes, including Procrustes...

Anthropometry
 Referenced in 5 articles
[sw23443]
 Package for Analysis of Anthropometric Data. Anthropometry: Statistical Methods for Anthropometric Data. Statistical methodologies especially ... statistical concept of data depth, statistical shape analysis and archetypal analysis...

ishapes
 Referenced in 3 articles
[sw08138]
 package for intrinsic statistical analysis of shapes...

Gephi
 Referenced in 36 articles
[sw12110]
 interacts with the representation, manipulate the structures, shapes and colors to reveal hidden properties ... complementary tool to traditional statistics, as visual thinking with interactive interfaces is now recognized ... This is a software for Exploratory Data Analysis, a paradigm appeared in the Visual Analytics...

MEGA
 Referenced in 25 articles
[sw09078]
 addition to the tools for statistical analysis of data, MEGA provides many convenient facilities ... motivation, design principles and priorities that have shaped the development of MEGA. We also discuss...

Deformetrica
 Referenced in 2 articles
[sw30726]
 software for the statistical analysis of 2D and 3D shape data. It essentially computes deformations...

Scalismo
 Referenced in 1 article
[sw34738]
 library for statistical shape modeling and modelbased image analysis in Scala, developed...

ads
 Referenced in 5 articles
[sw24236]
 package ads: Spatial Point Patterns Analysis. Perform first and secondorder multiscale analyses derived ... rectangular, circular or irregular shaped sampling windows, with tests of statistical significance based on Monte...

fdaPDE
 Referenced in 5 articles
[sw21040]
 Data Analysis and Partial Differential Equations; Statistical Analysis of Functional and Spatial Data, Based ... models efficiently handle data distributed over irregularly shaped domains and can comply with various conditions...

ODoSE
 Referenced in 1 article
[sw16945]
 statistic for the entire core genome, allowing for systematic analysis of the evolutionary forces shaping...

rcosmo
 Referenced in 3 articles
[sw29792]
 Spherical data handling and analysis with R package rcosmo. The R package rcosmo was developed ... shaped. For each type of data we provide a brief description of the corresponding statistical ... readytouse R code. Some statistical functionality of rcosmo is demonstrated for the example ... data into the HEALPix format and statistical analysis with rcosmo for geostatisticians...

Datamonkey
 Referenced in 1 article
[sw32768]
 have shaped extant genetic diversity is a cornerstone of modern comparative sequence analysis. Advances ... sequence generation and increased statistical sophistication of relevant methods now allow researchers to extract ever...

moleculaRnetworks
 Referenced in 2 articles
[sw27065]
 Statistical Computing. These scripts, named moleculaRnetworks, are intended for the geometric and solvent network analysis ... novel method for identifying the geometric shape adopted by the solvent in the immediate vicinity ... data arrays, and an interactive analysis script that enables statistical, trend, and correlation analysis...

ShapePheno
 Referenced in 1 article
[sw14414]
 ShapePheno: unsupervised extraction of shape phenotypes from biological image collections. Motivation: Accurate largescale phenotyping ... acquisition as the major bottleneck. Automatic image analysis is one major strategy to phenotype individuals ... visual phenotyping focus predominantly on summarizing statistics and geometric measures, such as height and width ... such as the local deformation of the shape of an individual with respect...

Kinkdetector
 Referenced in 2 articles
[sw29680]
 shape of (alpha)helices in proteins, we formulate a parametric statistical model, which incorporates ... direction of the helix. We propose a statistical model for the straight (alpha)helix ... geometric model for (alpha)helices, but our statistical formulation, for the first time, quantifies ... help in such cases. Further, an analysis of crowdsourced curved (alpha)helices finds that Kink...

Stellar
 Referenced in 1 article
[sw23843]
 making them more suitable for finite element analysis. Stellar employs a broad selection of improvement ... insertion, and edge contraction. If the domain shape has no small angles, Stellar routinely improves ... both as objective functions and for mesh statistics), control of tetrahedron sizes, and transformations that...

TrajStat
 Referenced in 1 article
[sw29470]
 TrajStat plugin for MeteoInfo Java version. Statistical analysis of air mass back trajectories combined with ... ESRI “PolylineZ” shape file format. In this type of shape file ... cluster can be computed using the cluster statistics function. Pollutant pathways could then be associated...

Thingi10K
 Referenced in 1 article
[sw34102]
 only draw from the same distribution of shapes people print in terms of class ... online 3D printing modelsharing database. Via analysis of both geometric (e.g., triangle aspect ratios ... characteristics. The complete dataset and permodel statistical data are freely available to the public...

DNAshapeR
 Referenced in 0 articles
[sw18973]
 visualization and further analysis. DNAshapeR further encodes DNA sequence and shape features as userdefined ... combinations of k mer and DNA shape features. The resulting feature matrices can be readily ... DNAshapeR software package was implemented in the statistical programming language R and is freely available...

dr4pl
 Referenced in 0 articles
[sw34842]
 package dr4pl: Dose Response Data Analysis using the 4 Parameter Logistic (4pl) Model. Models ... when data have outliers or nonlogistic shapes. This package provides robust estimation methods that ... that work well for data lacking logistic shapes. We provide the bounds on the parameters ... zero and base their justification in a statistical principle. These methods are used as remedies...