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SPACE
- Referenced in 34 articles
[sw04716]
- space (Stochastic Process Analysis of Computer Experiments): The code is useful for analysis and global ... Fitting or Estimation of the stochastic process model parameters Cross validation of the model...
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Church
- Referenced in 50 articles
[sw08946]
- Church, a universal language for describing stochastic generative processes. Church is based on the Lisp ... also includes a novel language construct, the stochastic memoizer, which enables simple description of many...
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pomp
- Referenced in 40 articles
[sw10664]
- working with partially observed Markov processes (POMPs, AKA stochastic dynamical systems, state-space models). ’pomp...
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SMART_
- Referenced in 33 articles
[sw04097]
- algorithms, are available. For the study of stochastic and timing behavior, both sparse-storage ... solution approaches are available when the underlying process is a Markov chain. In addition, discrete ... always applicable regardless of the stochastic nature of the process, but certain classes...
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YUIMA
- Referenced in 42 articles
[sw11399]
- discretely observed fractional Ornstein-Uhlenbeck process solution of the stochastic differential equation...
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RobustGaSP
- Referenced in 6 articles
[sw26272]
- package RobustGaSP: Robust Gaussian Stochastic Process Emulation. Robust parameter estimation and prediction of Gaussian stochastic ... parameter estimation and prediction using Gaussian stochastic process emulator. See the reference: Mengyang Gu, Xiaojing...
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URDME
- Referenced in 25 articles
[sw10400]
- modular framework for stochastic simulation of reaction-transport processes in complex geometries. We have developed ... URDME, a flexible software framework for general stochastic reaction-transport modeling and simulation. URDME uses ... Diffusion Master Equation formalism to model the processes under study. An interface to a mature...
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MAGP
- Referenced in 9 articles
[sw14019]
- consider the class of real-valued stochastic processes indexed on a compact subset...
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PEPA
- Referenced in 116 articles
[sw10692]
- Evaluation Process Algebra. PEPA tools: The PEPA process algebra is supported by the PEPA Eclipse ... model checking properties in the Continuous Stochastic Logic (CSL). Download the PEPA Eclipse Plug...
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Bio-PEPAd
- Referenced in 5 articles
[sw10690]
- this paper, we enrich the stochastic process algebra Bio-PEPA, with the possibility of assigning ... actions, yielding a new non-Markovian stochastic process algebra: Bio-PEPAd. This is a conservative ... approach, earlier presented in papers on the stochastic simulation of biological systems with delays. This ... generalized semi-Markov processes (GSMPs), as input for a delay stochastic simulation algorithm (DSSA...
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GSHMC
- Referenced in 16 articles
[sw02631]
- dynamic information throughout the sampling process similar to stochastic Langevin and Brownian dynamics simulations...
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Rate4Site
- Referenced in 7 articles
[sw35756]
- tree, as well as the underlying stochastic process. To demonstrate its potency, we study...
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PALOMA
- Referenced in 6 articles
[sw20778]
- Markovian agents. We present a novel stochastic process algebra that allows the expression of models...
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CASPA
- Referenced in 4 articles
[sw02863]
- efficient symbolic elimination algorithm for the stochastic process algebra tool CASPA. CASPA is a stochastic...
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fptdApprox
- Referenced in 6 articles
[sw06381]
- time density functions associated to certain stochastic processes. Such a strategy is based...
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HASL
- Referenced in 6 articles
[sw13330]
- verification of discrete event stochastic processes (DESP). HASL employs Linear Hybrid Automata (LHA) as machineries...
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ctmm
- Referenced in 4 articles
[sw21677]
- relocation data as a continuous-time stochastic process. ctmm is an R package for analyzing ... tracking data as a continuous-time stochastic processes. Package features include FFT variogram and Lomb...
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COSMOS
- Referenced in 5 articles
[sw13329]
- execution paths of a Discrete Event Stochastic Process (DESP), a class of stochastic models which...
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DET2STO
- Referenced in 5 articles
[sw05102]
- DET2STO is a tool that transforms a stochastic version of a model written in AMPL ... then processed by the algebraic modeling language AMPL and optimized by a solver. Stochastic Programming ... described by an event tree. The stochastic process is assumed to be independent ... else than an extensive formulation of the stochastic programming version of the problem...
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ProbCD
- Referenced in 5 articles
[sw20338]
- expectation of a Bernoulli Scheme stochastic process given the categorization probabilities. An on-line interface ... enrichment analysis, ProbCD can accommodate: (i) the stochastic nature of the high-throughput experimental techniques...