• eigs

  • Referenced in 318 articles [sw03702]
  • Lanczos method in the symmetric case). Using a truncated variant of the implicitly shifted...
  • IRAM

  • Referenced in 196 articles [sw08795]
  • Lanczos method in the symmetric case). Using a truncated variant of the implicitly shifted...
  • L-BFGS

  • Referenced in 735 articles [sw03229]
  • also be used for unconstrained problems and in this case performs similarly to its predecessor...
  • GMRFLib

  • Referenced in 286 articles [sw06641]
  • representing and understanding GMRFs. Various case studies illustrate the use of GMRFs in complex hierarchical...
  • VODE

  • Referenced in 194 articles [sw01005]
  • order change are used. Moreover, in the stiff case, the code has the possibility ... ends with some comparison tests with EPISODE using one and two-dimensional versions ... Jacobian is banded in all cases. It is found that the run time is reduced...
  • JDQZ

  • Referenced in 578 articles [sw07031]
  • JDQZ algorithm. The JDQZ algorithm can be used for computing a few selected eigenvalues with ... Hermitian, .... The algorithm is effective especially in case A and B are sparse ... large size. The Jacobi-Davidson method is used to compute a partial generalized Schur decomposition...
  • LBFGS-B

  • Referenced in 335 articles [sw05142]
  • also be used for unconstrained problems and in this case performs similarly to its predecessor...
  • JDQR

  • Referenced in 489 articles [sw04021]
  • JDQR algorithm. The JDQR algorithm can be used for computing a few selected eigenvalues with ... case A is sparse and of large size. The Jacobi-Davidson method is used...
  • gamair

  • Referenced in 290 articles [sw11132]
  • author used a fairly smooth way even in the case of advanced statistical notions...
  • KELLEY

  • Referenced in 610 articles [sw04829]
  • methods discussed in the respective chapter using the parameter identification problem and the discretized optimal ... objective function involves computer simulations. In such cases the noise often introduces artificial minimizers. Gradient ... three simple examples that are later used to demonstrate the behavior of optimization algorithms. Chapter...
  • SemiPar

  • Referenced in 697 articles [sw07116]
  • model in this book is a special case of the linear mixed model ... selection of material and emphases and are used throughout the book. The book is suitable...
  • L-BFGS-B

  • Referenced in 172 articles [sw01234]
  • also be used for unconstrained problems and in this case performs similarly to its predecessor...
  • PSI-BLAST

  • Referenced in 230 articles [sw17324]
  • specific score matrix, and searching the database using this matrix. The resulting Position-Specific Iterated ... iteration as gapped BLAST, but in many cases is much more sensitive to weak ... biologically relevant sequence similarities. PSI-BLAST is used to uncover several new and interesting members...
  • Harwell-Boeing sparse matrix collection

  • Referenced in 210 articles [sw08516]
  • used as counter-examples to hypotheses in sparse matrix research, to large test cases arising ... algorithms. The procedures for obtaining and using the test collection are discussed. We also describe...
  • HOL Light

  • Referenced in 293 articles [sw06580]
  • system. Theorem provers in this family use a version of ML as both the implementation ... interaction language; in HOL Light’s case this is Objective CAML (OCaml). Thanks...
  • LSODE

  • Referenced in 132 articles [sw04374]
  • dy/dt = f(t,y). In the stiff case, it treats the Jacobian matrix df/dy ... difference quotients. It uses Adams methods (predictor-corrector) in the nonstiff case, and Backward Differentiation...
  • CUTE

  • Referenced in 218 articles [sw14681]
  • LANCELOT, we believe that they will be useful in their own right and should ... number of sources and may, in many cases, be installed automatically. The scope ... written in the standard input format (SIF) used by the LANCELOT software package is described...
  • TAO

  • Referenced in 44 articles [sw10597]
  • high-performance parallel architectures. Our case study uses the GPCG (gradient projection, conjugate gradient) algorithm...
  • GLLAMM

  • Referenced in 61 articles [sw06517]
  • installation). gllamm maximises the marginal log-likelihood using Stata’s version of the Newton Raphson ... Algorithm (ml with method d0). In the case of discrete random effects or factors ... evaluated exactly whereas numerical integration is used for continuous (multivariate) normal random effects or factors ... been used by comparing solutions with different numbers quadrature points. In most cases adaptive quadrature...
  • COUPLEX

  • Referenced in 31 articles [sw07861]
  • simplified albeit realistic test cases aimed at simulating the transport of radionuclides around a nuclear ... repository. Three different models were used. The first test case is related to simulations based ... field model close to those used for safety assessments in nuclear waste management. It leads ... third test case is to use the results of the near-field computation (COUPLEX...