• VaZyMolO

  • Referenced in 1 article [sw16899]
  • complete viral genome sequences of both negative- and positive-sense, single-stranded RNA viruses available...
  • RNA2D3D

  • Referenced in 1 article [sw17141]
  • primary and secondary structure information of an RNA molecule, the program RNA2D3D automatically and rapidly ... Illustrative applications in the areas of ribozymes, viral kissing loops, viral internal ribosome entry sites...
  • Maple

  • Referenced in 5040 articles [sw00545]
  • The result of over 30 years of cutting...
  • Matlab

  • Referenced in 12074 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • R

  • Referenced in 8359 articles [sw00771]
  • R is a language and environment for statistical...
  • fastDNAml

  • Referenced in 92 articles [sw06651]
  • fastDNAml is a program for estimating maximum likelihood...
  • PAUP*

  • Referenced in 51 articles [sw07834]
  • PAUP*: phylogenetic analysis under parsimony. PAUP* version 4.0...
  • MAFFT

  • Referenced in 41 articles [sw08304]
  • MAFFT: Multiple alignment program for amino acid or...
  • C-GRAAL

  • Referenced in 3 articles [sw08317]
  • C-GRAAL: Common-neighbors-based global GRAph ALignment...
  • DEseq

  • Referenced in 48 articles [sw10344]
  • DESeq: Differential gene expression analysis based on the...
  • PhyML

  • Referenced in 9 articles [sw10915]
  • PhyML is a software that estimates maximum likelihood...
  • PAML

  • Referenced in 40 articles [sw10916]
  • Phylogenetic Analysis by Maximum Likelihood (PAML). PAML is...
  • BayesDA

  • Referenced in 1097 articles [sw11008]
  • BayesDA: Functions and Datasets for the book ”Bayesian...
  • ClustalW

  • Referenced in 133 articles [sw12016]
  • CLUSTAL W: improving the sensitivity of progressive multiple...
  • COPASI

  • Referenced in 62 articles [sw12253]
  • COPASI: biochemical network simulator. COPASI is a software...
  • MUSCLE

  • Referenced in 71 articles [sw13193]
  • Muscle: multiple sequence alignment with high accuracy and...
  • MMC

  • Referenced in 9 articles [sw13879]
  • A logical encoding of the π-calculus: Model...
  • Python

  • Referenced in 1378 articles [sw14460]
  • Python is a widely used high-level, general...