RUVseq

RUVSeq: Remove Unwanted Variation from RNA-Seq Data. This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples.

Keywords for this software

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References in zbMATH (referenced in 2 articles )

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  1. Nguyen, Yet; Nettleton, Dan; Liu, Haibo; Tuggle, Christopher K.: Detecting differentially expressed genes with RNA-seq data using backward selection to account for the effects of relevant covariates (2015)
  2. Datta, Somnath (ed.); Nettleton, Dan (ed.): Statistical analysis of next generation sequencing data (2014)