Haploview: analysis and visualization of LD and haplotype maps. Research over the last few years has revealed significant haplotype structure in the human genome. The characterization of these patterns, particularly in the context of medical genetic association studies, is becoming a routine research activity. Haploview is a software package that provides computation of linkage disequilibrium statistics and population haplotype patterns from primary genotype data in a visually appealing and interactive interface.
Keywords for this software
References in zbMATH (referenced in 6 articles )
Showing results 1 to 6 of 6.
- Sun, M.; Jobling, M.A.; Taliun, D.; Pramstaller, P.P.; Egeland, T.; Sheehan, N.A.: On the use of dense SNP marker data for the identification of distant relative pairs (2016)
- Liu, Jia-Rou; Kuo, Po-Hsiu; Hung, Hung: A robust rerank approach for feature selection and its application to pooling-based GWA studies (2013)
- Zhang, Yu; Zhang, Jing; Liu, Jun S.: Block-based Bayesian epistasis association mapping with application to WTCCC type 1 diabetes data (2011)
- Frommlet, Florian: Tag SNP selection based on clustering according to dominant sets found using replicator dynamics (2010)
- Bingham, Ella; Mannila, Heikki: Complexity control in a mixture model by the Hardy-Weinberg equilibrium (2009)
- Ao, S.I.; Ng, Michael K.; Sham, Pak C.: Constrained unidimensional scaling with application to genomics (2007)