References in zbMATH (referenced in 69 articles )

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  1. Cygan, M.; Kubica, M.; Radoszewski, J.; Rytter, W.; Waleń, T.: Polynomial-time approximation algorithms for weighted LCS problem (2016)
  2. Nguyen, Ken; Guo, Xuan; Pan, Yi: Multiple biological sequence alignment. Scoring functions, algorithms and evaluation (2016)
  3. Pesch, Robert: Cross-species network and transcript transfer (2016)
  4. Axelson-Fisk, Marina: Comparative gene finding. Models, algorithms and implementation (2015)
  5. Mora-Gutiérrez, Roman Anselmo; Lárraga-Ramírez, María E.; Rincón-García, Eric A.; Ponsich, Antonin; Ramírez-Rodríguez, Javier: Adaptation of the method of musical composition for solving the multiple sequence alignment problem (2015)
  6. Picardi, Ernesto (ed.): RNA bioinformatics (2015)
  7. Federico, Maria; Peterlongo, Pierre; Pisanti, Nadia; Sagot, Marie-France: Rime: repeat identification (2014)
  8. Hsu, Yi-Yu; Chen, Wei-Jhih; Chen, Shu-Hui; Kao, Hung-Yu: Using hidden Markov models to predict DNA-binding proteins with sequence and structure information (2014)
  9. Le Thi, Hoai An; Dinh, Tao Pham; Belghiti, Moulay: DCA based algorithms for multiple sequence alignment (MSA) (2014)
  10. Daugelaite, Jurate; O’Driscoll, Aisling; Sleator, Roy D.: An overview of multiple sequence alignments and cloud computing in bioinformatics (2013)
  11. Jia, Hui; Li, Jinming: Finding transcription factor binding motifs for coregulated genes by combining sequence overrepresentation with cross-species conservation (2012)
  12. Saeed, Fahad; Perez-Rathke, Alan; Gwarnicki, Jaroslaw; Berger-Wolf, Tanya; Khokhar, Ashfaq: A high performance multiple sequence alignment system for pyrosequencing reads from multiple reference genomes (2012)
  13. Sun, Jun; Wu, Xiaojun; Fang, Wei; Ding, Yangrui; Long, Haixia; Xu, Webo: Multiple sequence alignment using the hidden Markov model trained by an improved quantum-behaved particle swarm optimization (2012)
  14. Díaz, David; Esteban, Francisco José; Hernández, Pilar; Caballero, Juan Antonio; Dorado, Gabriel; Gálvez, Sergio: Parallelizing and optimizing a bioinformatics pairwise sequence alignment algorithm for many-core architecture (2011)
  15. La Rosa, Massimo; Rizzo, Riccardo; Urso, Alfonso: Soft topographic maps for clustering and classifying bacteria using housekeeping genes (2011)
  16. Malaspinas, Anna-Sapfo; Eriksson, Nicholas; Huggins, Peter: Parametric analysis of alignment and phylogenetic uncertainty (2011)
  17. Amir, Amihood; Gotthilf, Zvi; Shalom, B.Riva: Weighted LCS (2010)
  18. Someya, Seizi; Kakuta, Masanori; Morita, Mizuki; Sumikoshi, Kazuya; Cao, Wei; Ge, Zhenyi; Hirose, Osamu; Nakamura, Shugo; Terada, Tohru; Shimizu, Kentaro: Prediction of carbohydrate-binding proteins from sequences using support vector machines (2010)
  19. Xia, Fei; Dou, Yong; Zhou, Dan; Li, Xin: Fine-grained parallel RNA secondary structure prediction using SCFGs on FPGA (2010)
  20. Lloyd, Scott; Snell, Quinn O.: Hardware accelerated sequence alignment with traceback (2009)

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