KEGG

KEGG: Kyoto Encyclopedia of Genes and Genomes. KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from genomic and molecular-level information. It is a computer representation of the biological system, consisting of molecular building blocks of genes and proteins (genomic information) and chemical substances (chemical information) that are integrated with the knowledge on molecular wiring diagrams of interaction, reaction and relation networks (systems information). It also contains disease and drug information (health information) as perturbations to the biological system.


References in zbMATH (referenced in 235 articles )

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  1. Ko, Daijin; Xu, Wanyan; Windle, Brad: Gene function classification using NCI-60 cell line gene expression profiles (2005)
  2. Mahoui, Malika; Lu, Lingma; Gao, Ning; Li, Nianhua; Chen, Jessica; Bukhres, Omran; Miled, Zina Ben: A dynamic workflow approach for the integration of bioinformatics services (2005) ioport
  3. Aoki, Kiyoko F.; Yamaguchi, Atsuko; Ueda, Nobuhisa; Akutsu, Tatsuya; Mamitsuka, Hiroshi; Goto, Susumu; Kanehisa, Minoru: Kcam (KEGG carbohydrate matcher): a software tool for analyzing the structures of carbohydrate sugar chains. (2004) ioport
  4. Kanehisa, Minoru; Goto, Susumu; Kawashima, Shuichi; Okuno, Yasushi; Hattori, Masahiro: The KEGG resource for deciphering the genome. (2004) ioport
  5. Rahnenführer, Jörg; Domingues, Francisco S.; Maydt, Jochen; Lengauer, Thomas: Calculating the statistical significance of changes in pathway activity from gene expression data (2004)
  6. Wu, Cathy H.; Huang, Hongzhan; Nikolskaya, Anastasia; Hu, Zhangzhi; Barker, Winona C.: The iProClass integrated database for protein functional analysis (2004)
  7. Zhang, Junwei; Aizawa, Masahiro; Amari, Shinji; Iwasawa, Yoshio; Nakano, Tatsuya; Nakata, Kotoko: Development of (Ki)Bank, a database supporting structure-based drug design (2004)
  8. Cho, Kwang-Hyun; Shin, Sung-Young; Kim, Hyun-Woo; Wolkenhauer, Olaf; McFerran, Brian; Kolch, Walter: Mathematical modeling of the influence of RKIP on the ERK signaling pathway (2003)
  9. Kanehisa, Minoru; Goto, Susumu; Kawashima, Shuichi; Nakaya, Akihiro: The KEGG databases at genomenet. (2002) ioport
  10. Sato, Yoko; Nakaya, Akihiro; Shiraishi, Kotaro; Kawashima, Shuichi; Goto, Susumu; Kanehisa, Minoru; Dunker, A. K.; Konagaya, A.; Miyano, S.; Takagi, T.: SSDB: Sequence similarity database in KEGG (2001) ioport
  11. Kanehisa, Minoru; Goto, Susumu: KEGG: Kyoto encyclopedia of genes and genomes. (2000) ioport
  12. Goto, Susumu; Shiraishi, Kotaro; Okamoto, Kayo; Ishida, Hiroko; Nakatani, Toshi; Deno, Tomoko; Kanehisa, Minoru; Dunker, A. K.; Konagaya, A.; Miyano, S.; Takagi, T.: Ortholog identifiers for integration of genomic and pathway information in KEGG (1999) ioport
  13. Nakao, Mitsuteru; Bono, Hidemasa; Kawashima, Shuichi; Kamiya, Tomomi; Sato, Kazushige; Goto, Susumu; Kanehisa, Minoru; Dunker, A. K.; Konagaya, A.; Miyano, S.; Takagi, T.: Genome-scale gene expression analysis and pathway reconstruction in KEGG (1999) ioport
  14. Ogata, Hiroyuki; Goto, Susumu; Sato, Kazushige; Fujibuchi, Wataru; Bono, Hidemasa; Kanehisa, Minoru: KEGG: Kyoto encyclopedia of genes and genomes. (1999) ioport
  15. Fujibuchi, Wataru; Goto, Susumu; Kanehisa, Minoru; Dunker, A. K.; Konagaya, A.; Miyano, S.; Takagi, T.: Deductive calculation library for KEGG pathway simulation (1996) ioport

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