ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs.
Keywords for this software
References in zbMATH (referenced in 4 articles )
Showing results 1 to 4 of 4.
- Cui, Shiqi; Ji, Tieming; Li, Jilong; Cheng, Jianlin; Qiu, Jing: What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment (2016)
- Lithio, Andrew; Nettleton, Dan: Hierarchical modeling and differential expression analysis for RNA-seq experiments with inbred and hybrid genotypes (2015)
- Nguyen, Yet; Nettleton, Dan; Liu, Haibo; Tuggle, Christopher K.: Detecting differentially expressed genes with RNA-seq data using backward selection to account for the effects of relevant covariates (2015)
- Niemi, Jarad; Mittman, Eric; Landau, Will; Nettleton, Dan: Empirical Bayes analysis of RNA-seq data for detection of gene expression heterosis (2015)