ArrayExpress - functional genomics data. ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.

References in zbMATH (referenced in 39 articles )

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  1. Kinzy, Tyler G.; Starr, Timothy K.; Tseng, George C.; Ho, Yen-Yi: Meta-analytic framework for modeling genetic coexpression dynamics (2019)
  2. Kruppa, Jochen; Kramer, Frank; Beißbarth, Tim; Jung, Klaus: A simulation framework for correlated count data of features subsets in high-throughput sequencing or proteomics experiments (2016)
  3. Yu, Da; Huang, Li-Jun; Chen, Na-Mi: Anesthetic propofol-induced gene expression changes in patients undergoing coronary artery bypass graft surgery based on dynamical differential coexpression network analysis (2016)
  4. Erciyes, K.: Distributed and sequential algorithms for bioinformatics (2015)
  5. Peltonen, Jaakko; Lin, Ziyuan: Information retrieval approach to meta-visualization (2015)
  6. Gertheiss, Jan: ANOVA for factors with ordered levels (2014)
  7. Lock, Eric F.; Hoadley, Katherine A.; Marron, J. S.; Nobel, Andrew B.: Joint and Individual Variation Explained (JIVE) for integrated analysis of multiple data types (2013)
  8. Jiao, Qing-Ju; Huang, Yan; Shen, Hong-Bin: Large-scale mining co-expressed genes in \textitArabidopsisanther: from pair to group (2011)
  9. Parkinson, Helen E.; Sarkans, Ugis; Kolesnikov, Nikolay; Abeygunawardena, Niran; Burdett, Tony; Dylag, Miroslaw; Emam, Ibrahim; Farne, Anna; Hastings, Emma; Holloway, Ele; Kurbatova, Natalja; Lukk, Margus; Malone, James; Mani, Roby; Pilicheva, Ekaterina; Rustici, Gabriella; Sharma, Anjan; Williams, Eleanor; Adamusiak, Tomasz; Brandizi, Marco; Sklyar, Nataliya; Brazma, Alvis: Arrayexpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments (2011) ioport
  10. Schmidberger, Markus; Vicedo, Esmeralda; Mansmann, Ulrich: Empirical study for the agreement between statistical methods in quality assessment and control of microarray data (2011)
  11. Doderer, Mark; Yoon, Kihoon; Robbins, Kay A.: SIDEKICK: genomic data driven analysis and decision-making framework (2010) ioport
  12. Meng, Guofeng; Mosig, Axel; Vingron, Martin: A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes (2010) ioport
  13. Mieczkowski, Jakub; Tyburczy, Magdalena E.; Dabrowski, Michal; Pokarowski, Piotr: Probe set filtering increases correlation between affymetrix genechip and qrt-PCR expression measurements (2010) ioport
  14. Rouam, Sigrid; Moreau, Thierry; Broët, Philippe: Identifying common prognostic factors in genomic cancer studies: A novel index for censored outcomes (2010) ioport
  15. Saito, Takaya; Sætrom, Pål: A two-step site and mrna-level model for predicting microrna targets (2010) ioport
  16. Caldas, José; Gehlenborg, Nils; Faisal, Ali; Brazma, Alvis; Kaski, Samuel: Probabilistic retrieval and visualization of biologically relevant microarray experiments (2009) ioport
  17. Corradi, Luca; Mirisola, Valentina; Porro, Ivan; Torterolo, Livia; Fato, Marco; 0001, Paolo Romano; Pfeffer, Ulrich: Survival online: a web-based service for the analysis of correlations between gene expression and clinical and follow-up data (2009) ioport
  18. Dondrup, Michael; Albaum, Stefan P.; Griebel, Thasso; Henckel, Kolja; Jünemann, Sebastian; Kahlke, Tim; Kleindt, Christiane K.; Küster, Helge; Linke, Burkhard; Mertens, Dominik; Mittard-Runte, Virginie; Neuweger, Heiko; Runte, Kai J.; Tauch, Andreas; Tille, Felix; Pühler, Alfred; Goesmann, Alexander: EMMA 2 - A MAGE-compliant system for the collaborative analysis and integration of microarray data (2009) ioport
  19. Gehlenborg, Nils; Brazma, Alvis: Visualization of large microarray experiments with space maps (2009) ioport
  20. Kauffmann, Audrey; Rayner, Tim F.; Parkinson, Helen E.; Kapushesky, Misha; Lukk, Margus; Brazma, Alvis; Huber, Wolfgang: Importing arrayexpress datasets into R/Bioconductor (2009) ioport

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