Aligning Protein Structures with GR-Align (GRaphlet-based Aligner). GR-Align is a fast heuristic procedure for aligning/comparing protein structures according to the Contact Map Opverlap maximization (CMO) paradigm. The algorithm is based on a Needleman-Wunch algorithm where the cost for matching two residues is their graphlet degree similarity.
Keywords for this software
References in zbMATH (referenced in 2 articles )
Showing results 1 to 2 of 2.
- Andjelković, Miroslav; Tadić, Bosiljka; Maletić, Slobodan; Rajković, Milan: Hierarchical sequencing of online social graphs (2015)
- Andonov, Rumen; Djidjev, Hristo; Klau, Gunnar W.; Boudic-Jamin, Mathilde Le; Wohlers, Inken: Automatic classification of protein structure using the maximum contact map overlap metric (2015)