MrBayes
MrBayes: Bayesian Inference of Phylogeny. MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. MrBayes uses Markov chain Monte Carlo (MCMC) methods to estimate the posterior distribution of model parameters.
Keywords for this software
References in zbMATH (referenced in 49 articles )
Showing results 1 to 20 of 49.
Sorted by year (- Heaps, Sarah E.; Nye, Tom M. W.; Boys, Richard J.; Williams, Tom A.; Cherlin, Svetlana; Embley, T. Martin: Generalizing rate heterogeneity across sites in statistical phylogenetics (2020)
- Lubiw, Anna; Maftuleac, Daniela; Owen, Megan: Shortest paths and convex hulls in 2D complexes with non-positive curvature (2020)
- Spade, David A.: An extended model for phylogenetic maximum likelihood based on discrete morphological characters (2020)
- Allman, Elizabeth S.; Long, Colby; Rhodes, John A.: Species tree inference from genomic sequences using the log-det distance (2019)
- Monod, Anthea; Kališnik, Sara; Patiño-Galindo, Juan Ángel; Crawford, Lorin: Tropical sufficient statistics for persistent homology (2019)
- Warnow, Tandy (ed.): Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret (2019)
- Allman, Elizabeth S.; Degnan, James H.; Rhodes, John A.: Split probabilities and species tree inference under the multispecies coalescent model (2018)
- Bouchard-Côté, Alexandre; Vollmer, Sebastian J.; Doucet, Arnaud: The bouncy particle sampler: a nonreversible rejection-free Markov chain Monte Carlo method (2018)
- Liu, Yong; Chen, Jingan; Qian, Jieying; Lin, Hao; Sun, Ning; Huang, Zunnan: Evolutionary analysis and structural characterization of \textitAquilariasinensis sesquiterpene synthase in agarwood formation: a computational study (2018)
- Stadler, Tanja; Gavryushkina, Alexandra; Warnock, Rachel C. M.; Drummond, Alexei J.; Heath, Tracy A.: The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes (2018)
- Venelin Mitov; Tanja Stadler: Parallel likelihood calculation for phylogenetic comparative models: The SPLITT C++ library (2018) not zbMATH
- Bordewich, Magnus; Linz, Simone; Semple, Charles: Lost in space? Generalising subtree prune and regraft to spaces of phylogenetic networks (2017)
- Keith, Jonathan M. (ed.): Bioinformatics. Volume I. Data, sequence analysis, and evolution (2017)
- Whidden, Chris; Matsen, Frederick A. IV: Ricci-Ollivier curvature of the rooted phylogenetic subtree-prune-regraft graph (2017)
- Ioanna Manolopoulou, Axel Hille: BPEC: An R Package for Bayesian Phylogeographic and Ecological Clustering (2016) arXiv
- Liers, Frauke; Martin, Alexander; Pape, Susanne: Binary Steiner trees: structural results and an exact solution approach (2016)
- Royer-Carenzi, Manuela; Didier, Gilles: A comparison of ancestral state reconstruction methods for quantitative characters (2016)
- Schrempf, Dominik; Minh, Bui Quang; De Maio, Nicola; von Haeseler, Arndt; Kosiol, Carolin: Reversible polymorphism-aware phylogenetic models and their application to tree inference (2016)
- Green, Peter J.; Łatuszyński, Krzysztof; Pereyra, Marcelo; Robert, Christian P.: Bayesian computation: a summary of the current state, and samples backwards and forwards (2015)
- Kumagai, Seiji; Uyenoyama, Marcy K.: Genealogical histories in structured populations (2015)