GeneNet

GeneNet: Modeling and Inferring Gene Networks GeneNet is a package for analyzing gene expression (time series) data with focus on the inference of gene networks. In particular, GeneNet implements the methods of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein and Strimmer (2006, 2007) for learning large-scale gene association networks (including assignment of putative directions).

Keywords for this software

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References in zbMATH (referenced in 5 articles )

Showing results 1 to 5 of 5.
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  1. Sang, Peijun; Wang, Liangliang; Cao, Jiguo: Weighted empirical likelihood inference for dynamical correlations (2019)
  2. Deng, Wanlu; Geng, Zhi; Li, Hongzhe: Learning local directed acyclic graphs based on multivariate time series data (2013)
  3. Müller, Hans-Georg; Yang, Wenjing: Dynamic relations for sparsely sampled Gaussian processes (2010)
  4. Telesca, Donatello; Inoue, Lurdes Y. T.; Neira, Mauricio; Etzioni, Ruth; Gleave, Martin; Nelson, Colleen: Differential expression and network inferences through functional data modeling (2009)
  5. Opgen-Rhein, Rainer; Strimmer, Korbinian: Inferring gene dependency networks from genomic longitudinal data: a functional data approach (2006)