PGAT: Prokaryotic Genome Analysis Tool. PGAT is designed to facilitate comparative analysis of closely related bacterial genomes under study. A novel algorithm was developed to identify the genes present in a set of genomes, and to map orthologs between the genomes. A web interface facilitates the exploration and analysis of the genomic similarities and differences between the various bacterial strains based on these ortholog mappings

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  1. Ernst, Corinna; Rahmann, Sven: PanCake: a data structure for pangenomes (2013)