PyMOL

PyMOL is a powerful and comprehensive molecular visualization product for rendering and animating 3D molecular structures.

Keywords for this software

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References in zbMATH (referenced in 21 articles )

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  1. Carr, Hamish (ed.); Garth, Christoph (ed.); Weinkauf, Tino (ed.): Topological methods in data analysis and visualization IV. Theory, algorithms, and applications. Selected papers based on the presentations at the TopoInVis workshop, Annweiler, Germany, 2015 (2017)
  2. Michael E. Fortunato, Coray M. Colina: pysimm: A python package for simulation of molecular systems (2017)
  3. Shivashankar, Nithin; Natarajan, Vijay: Efficient software for programmable visual analysis using Morse-Smale complexes (2017)
  4. Carugo, Oliviero (ed.); Eisenhaber, Frank (ed.): Data mining techniques for the life sciences (2016)
  5. Linsen, Lars (ed.); Hamann, Bernd (ed.); Hege, Hans-Christian (ed.): Visualization in medicine and life sciences III. Towards making an impact. Selected papers based on the presentations at the third international workshop, VMLS, Leipzig, Germany, June 16--18, 2013 (2016)
  6. Schütte, Christof; Koltai, Péter; Klus, Stefan: On the numerical approximation of the Perron-Frobenius and Koopman operator (2016)
  7. Simon Mitternacht: FreeSASA: An open source C library for solvent accessible surface area calculations (2016) arXiv
  8. García-Martínez, J.M.; Garzón, E.M.; Cecilia, J.M.; Pérez-Sánchez, H.; Ortigosa, P.M.: An efficient approach for solving the HP protein folding problem based on UEGO (2015)
  9. Jiang, Yi; Xie, Yang; Ying, Jinyong; Xie, Dexuan; Yu, Zeyun: SDPBS web server for calculation of electrostatics of ionic solvated biomolecules (2015)
  10. Fan, Haifu; Gu, Yuanxin; He, Yao; Lin, Zhengjiong; Wang, Jiawei; Yao, Deqiang; Zhang, Tao: Applications of direct methods in protein crystallography for dealing with diffraction data down to 5 Åresolution (2014)
  11. Zok, Tomasz; Popenda, Mariusz; Szachniuk, Marta: MCQ4Structures to compute similarity of molecule structures (2014)
  12. Kondov, Ivan: Protein structure prediction using distributed parallel particle swarm optimization (2013)
  13. Hymavati; Kumar, Vivek; Sobhia, M.Elizabeth: Implication of crystal water molecules in inhibitor binding at ALR2 active site (2012)
  14. Lilkova, Elena; Nacheva, Genoveva; Petkov, Peicho; Petkov, Petko; Markov, Stoyan; Ilieva, Nevena; Litov, Leandar: Metadynamics study of mutant human interferon-gamma forms (2012)
  15. Linsen, Lars (ed.); Hagen, Hans (ed.); Hamann, Bernd (ed.); Hege, Hans-Christian (ed.): Visualization in Medicine and Life Sciences II. Progress and New Challenges. Selected papers based on the presentations at the second international workshop, VMLS, Bremerhaven, Germany, June 22--24, 2009 (2012)
  16. Padilla, Jennifer E.; Liu, Wenyan; Seeman, Nadrian C.: Hierarchical self assembly of patterns from the Robinson tilings: DNA tile design in an enhanced tile assembly model (2012)
  17. Burkowski, Forbes J.: Structural bioinformatics. An algorithmic approach (2009)
  18. Meinke, Jan H.; Mohanty, Sandipan; Eisenmenger, Frank; Hansmann, Ulrich H.E.: SMMP v. 3.0-simulating proteins and protein interactions in Python and Fortran (2008)
  19. Zuo, Zhili; Gang, Chen; Zou, Hanjun; Mok, Puah Chum; Zhu, Weiliang; Chen, Kaixian; Jiang, Hualiang: Why does $\beta $-secretase zymogen possess catalytic activity? Molecular modeling and molecular dynamics simulation studies (2007)
  20. Knight, William; Hill, Walter; Lodmell, J.Stephen: Ribosome Builder: a software project to simulate the ribosome (2005)

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