• Turtle

  • Referenced in 2 articles [sw20511]
  • efficient algorithms. Motivation: Counting the frequencies of k -mers in read libraries is often...
  • findGSE

  • Referenced in 1 article [sw34135]
  • diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a skew normal distribution ... needs to input a k value and a corresponding k-mer histo file generated with ... columns. The first column gives frequencies at which k-mers occur in reads, while...
  • KAT

  • Referenced in 1 article [sw37889]
  • novo genome assemblies, primarily via their k-mer frequencies and GC composition. KAT enables users ... genome assemblies through pairwise comparison of k-mers present in both input reads...
  • ntCard

  • Referenced in 2 articles [sw36895]
  • mers, F0, and also the k-mer coverage frequency histogram...
  • SAKEIMA

  • Referenced in 1 article [sw36894]
  • SAKEIMA, to approximate the frequent (k)-mers and their frequencies in a high-throughput sequencing ... SAKEIMA allows to rigorously approximate frequent (k)-mers by processing only a fraction ... that the frequencies estimated by SAKEIMA lead to accurate estimates of (k)-mer based distances...
  • AUTO-MUTE

  • Referenced in 9 articles [sw16878]
  • AUTO-MUTE: web-based tools for predicting stability...
  • BLAT

  • Referenced in 36 articles [sw16891]
  • BLAT — The BLAST-Like Alignment Tool. Analyzing vertebrate...
  • RSEM

  • Referenced in 11 articles [sw17160]
  • RSEM: accurate transcript quantification from RNA-Seq data...
  • GPCR-2L

  • Referenced in 22 articles [sw22409]
  • GPCR-2L: predicting G protein-coupled receptors and...
  • iLoc-Euk

  • Referenced in 37 articles [sw22434]
  • iLoc-Euk: a multi-label classifier for predicting...
  • AFP-Pred

  • Referenced in 24 articles [sw22441]
  • AFP-Pred: A random forest approach for predicting...
  • Quat-2L

  • Referenced in 15 articles [sw22469]
  • Quat-2L: a web-server for predicting protein...
  • GPCR-CA

  • Referenced in 35 articles [sw25949]
  • GPCR-CA: A cellular automaton image approach for...
  • SigHunt

  • Referenced in 1 article [sw30007]
  • SigHunt: horizontal gene transfer finder optimized for eukaryotic...