• pysimm

  • Referenced in 1 article [sw20621]
  • applications specifically in the area of amorphous polymer simulations...
  • Polymatic

  • Referenced in 1 article [sw22743]
  • codes for structure generation of amorphous polymers by a simulated polymerization algorithm. The main task...
  • Matlab

  • Referenced in 12477 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • AMBER

  • Referenced in 55 articles [sw01333]
  • AmberTools is a set of programs for biomolecular...
  • Gromacs

  • Referenced in 117 articles [sw04128]
  • GROMACS is a versatile package to perform molecular...
  • ABAQUS

  • Referenced in 1485 articles [sw04215]
  • The Abaqus Unified FEA product suite offers powerful...
  • CHARMM

  • Referenced in 115 articles [sw05953]
  • CHARMM (Chemistry at HARvard Macromolecular Mechanics). CHARMM models...
  • PyMOL

  • Referenced in 39 articles [sw09662]
  • PyMOL is a powerful and comprehensive molecular visualization...
  • Packmol

  • Referenced in 12 articles [sw13408]
  • Packmol: a package for building initial configurations for...
  • Python

  • Referenced in 1582 articles [sw14460]
  • Python is a widely used high-level, general...
  • HYPLAS

  • Referenced in 179 articles [sw17661]
  • Computational methods for plasticity. Theory and applications. The...
  • VMD

  • Referenced in 83 articles [sw18651]
  • VMD is a molecular visualization program for displaying...
  • SoftwareX

  • Referenced in 10 articles [sw19145]
  • SoftwareX - This journal is a peer reviewed, open...
  • OpenMM

  • Referenced in 7 articles [sw19831]
  • OpenMM: A high performance toolkit for molecular simulation...
  • Rdkit

  • Referenced in 6 articles [sw22741]
  • Rdkit: Open-source cheminformatics. A collection of cheminformatics...
  • Mdtraj

  • Referenced in 2 articles [sw22742]
  • Mdtraj: A modern open library for the analysis...
  • nusimm

  • Referenced in 1 article [sw22744]
  • nuSIMM: nanoHUB user Simulation Interface for Molecular Modeling...
  • nanoHUB

  • Referenced in 2 articles [sw22745]
  • nanoHUB.org is the premier place for computational nanotechnology...