• TRAB

  • Referenced in 1 article [sw39697]
  • mutation frequencies are above an unknown background. To rigorously determine whether a gene ... genes have alterations that are involved in carcinogenesis requires a comparison ... prevalence of identified changes to a control mutation frequency present in tumor DNA. To facilitate ... evaluates whether the frequency of somatic mutation in a given gene is higher than that...
  • POWER_SAGE

  • Referenced in 1 article [sw31109]
  • expression level of a gene by measuring the frequency of a sequence tag derived from ... developed to detect significant differences in tag frequency between two samples. However, which ... greatest power to detect real changes remains undetermined. Results: This paper compares ... three statistical tests for detecting significant changes of gene expression in SAGE experiments. The comparison...
  • SigHunt

  • Referenced in 1 article [sw30007]
  • through horizontal gene transfer (also called lateral gene transfer), often with functions novel ... vector of tetranucleotide (4-mer) frequencies using a sliding window approach. Extending the neighbourhood ... frequency. We score the number of 4-mer frequencies in the sliding window that deviate ... Thus, it is suited to scanning for change in organisms with different DNA composition. Availability...
  • Maple

  • Referenced in 5363 articles [sw00545]
  • The result of over 30 years of cutting...
  • Mathematica

  • Referenced in 6337 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13460 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • nauty

  • Referenced in 609 articles [sw00611]
  • graph-theoretic program NAUTY: nauty is a program...
  • Octave

  • Referenced in 304 articles [sw00646]
  • GNU Octave is a high-level language, primarily...
  • R

  • Referenced in 9810 articles [sw00771]
  • R is a language and environment for statistical...
  • TSPLIB

  • Referenced in 697 articles [sw00983]
  • TSPLIB is a library of sample instances for...
  • AUTO

  • Referenced in 942 articles [sw01059]
  • AUTO is a software for continuation and bifurcation...
  • SNOPT

  • Referenced in 543 articles [sw02300]
  • SNOPT: An SQP algorithm for large-scale constrained...
  • DT-CWT

  • Referenced in 100 articles [sw02857]
  • Research on pixel-level image fusion algorithm based...
  • S-PLUS

  • Referenced in 615 articles [sw02892]
  • S-PLUS is a powerful environment for statistical...
  • DASSL

  • Referenced in 262 articles [sw03174]
  • Subroutine DDASSL uses the backward differentiation formulas of...
  • PDETWO

  • Referenced in 17 articles [sw03205]
  • Implementation of PDETWO code to non-ideal MHD...
  • SeDuMi

  • Referenced in 1272 articles [sw04002]
  • SeDuMi is a Matlab toolbox for solving optimization...
  • UCI-ml

  • Referenced in 3379 articles [sw04074]
  • UC Irvine Machine Learning Repository. We currently maintain...