• Cell-PLoc

  • Referenced in 90 articles [sw09126]
  • various organisms. Information on subcellular localization of proteins is important to molecular cell biology, proteomics ... specialized for eukaryotic, human, plant, Gram-positive bacterial, Gram-negative bacterial and viral proteins, respectively...
  • pLoc-mGneg

  • Referenced in 23 articles [sw25190]
  • mGneg: Predict subcellular localization of Gram-negative bacterial proteins by deep gene ontology learning ... study is focused on the Gram-negative bacterial proteins. Although considerable efforts have been made ... evidences have indicated that many Gram-negative bacterial proteins exist in two or more location ... predicting the subcellular localization of Gram-negative bacterial proteins with both single and multiple locations...
  • Gneg-mPLoc

  • Referenced in 16 articles [sw25879]
  • predicting subcellular localization of Gram-negative bacterial proteins. By incorporating the information of gene ontology ... used to identify Gram-negative bacterial proteins among the following eight locations: (1) cytoplasm...
  • SecretP

  • Referenced in 14 articles [sw22470]
  • developed to predict secreted proteins of Gram-negative and Gram-positive bacteria ... identifying bacterial secreted proteins with those of six published methods, proteins in Escherichia coli ... construct the test sets of Gram-negative and Gram-positive bacteria, and the prediction results ... also yields satisfactory results for Gram-negative bacterial proteins. The prediction server SecretP...
  • pLoc_bal-mGneg

  • Referenced in 7 articles [sw28523]
  • mGneg: predict subcellular localization of Gram-negative bacterial proteins by quasi-balancing training dataset ... identifying the subcellular localization of Gram-negative bacterial proteins. Its performance is overwhelmingly better than ... label systems in which some proteins, called “multiplex proteins”, may simultaneously occur ... identifying the subcellular localization of Gram-negative bacterial proteins. To maximize the convenience for most...
  • PSLpred

  • Referenced in 5 articles [sw35525]
  • predicting subcellular localization of gram-negative bacterial proteins with an overall accuracy of 91.2%. PSLpred...
  • Psortb

  • Referenced in 18 articles [sw11344]
  • Psortb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome ... Motivation: PSORTb v.1.1 is the most precise bacterial localization prediction tool available. However, the program ... method is only applicable to Gram-negative bacteria. The goals of the present work ... existing precision level, expand it to include Gram-positive bacteria and then carry...
  • PROFtmb

  • Referenced in 4 articles [sw11343]
  • bacterial transmembrane beta barrel proteins. PROFtmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative ... validated testing set is 86% while whole-protein discrimination accuracy was 70 at 60% coverage ... whole-proteome predictions from 78 Gram-negative bacterial genomes and is available freely and without...
  • ngLOC

  • Referenced in 1 article [sw22472]
  • Bayesian classifier that predicts subcellular localization of proteins both in prokaryotes and eukaryotes. The overall ... distinct locations on gram-positive and gram-negative bacterial datasets, respectively. CONCLUSIONS: ngLOC ... variety of species or classes for predicting protein subcellular localization. The standalone software is freely...
  • pSuc-Lys

  • Referenced in 31 articles [sw16643]
  • pSuc-Lys: predict lysine succinylation sites in proteins...
  • propy

  • Referenced in 27 articles [sw22402]
  • propy: a tool to generate various modes of...
  • iDNA-Prot

  • Referenced in 16 articles [sw22410]
  • iDNA-Prot: identification of DNA binding proteins using...
  • iRSpot-TNCPseAAC

  • Referenced in 31 articles [sw22412]
  • iRSpot-TNCPseAAC: Identify Recombination Spots with Trinucleotide Composition...
  • iPPI-Esml

  • Referenced in 26 articles [sw22413]
  • iPPI-Esml: An ensemble classifier for identifying the...
  • iDrug-Target

  • Referenced in 13 articles [sw22415]
  • iDrug-Target: predicting the interactions between drug compounds...