
WinBUGS
 Referenced in 490 articles
[sw04492]
 BUGS project, which aims to make practical MCMC methods available to applied statisticians. WinBUGS...

GMRFLib
 Referenced in 200 articles
[sw06641]
 only possible using Markov Chain Monte Carlo (MCMC) techniques. The preeminent experts in the field ... aspects, construct fast and reliable algorithms for MCMC inference, and provide an online Clibrary...

BUGS
 Referenced in 257 articles
[sw07885]
 statistical models using Markov chain Monte Carlo (MCMC) methods. The project began...

spBayes
 Referenced in 214 articles
[sw10160]
 involves computationally intensive Markov chain Monte Carlo (MCMC) methods whose efficiency depends upon the specific...

CODA
 Referenced in 154 articles
[sw04290]
 package coda: Output analysis and diagnostics for MCMC , Output analysis and diagnostics for Markov Chain ... output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests of convergence...

JAGS
 Referenced in 96 articles
[sw08040]
 hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS...

MLwiN
 Referenced in 79 articles
[sw04837]
 likelihood estimation and Markov Chain Monte Carlo (MCMC) methods. MLwiN is based on an earlier...

Stan
 Referenced in 60 articles
[sw10200]
 language implementing full Bayesian statistical inference with MCMC sampling (NUTS, HMC) and penalized maximum likelihood...

OpenBUGS
 Referenced in 52 articles
[sw08316]
 expert system’, which determines an appropriate MCMC (Markov chain Monte Carlo) scheme (based...

rjags
 Referenced in 28 articles
[sw08039]
 rjags: Bayesian graphical models using MCMC. Interface to the JAGS MCMC library. The rjags package ... analysis. JAGS uses Markov Chain Monte Carlo (MCMC) to generate a sequence of dependent samples...

BayesTree
 Referenced in 43 articles
[sw07995]
 accomplished via an iterative Bayesian backfitting MCMC algorithm that generates samples from a posterior. Effectively...

Mcmcpack
 Referenced in 28 articles
[sw07974]
 MCMCpack: Markov chain Monte Carlo (MCMC) Package. This package contains functions to perform Bayesian inference ... Library Version 1.0.3. All models return coda mcmc objects that can then be summarized using...

SSS
 Referenced in 20 articles
[sw07794]
 approaches such as Markov chain Monte Carlo (MCMC) methods are often infeasible or ineffective ... from gene expression cancer genomics, comparisons with MCMC and other methods, and theoretical and simulation...

BEAST
 Referenced in 24 articles
[sw12588]
 BEAST 2 uses Markov chain Monte Carlo (MCMC) to average over tree space, so that...

BRugs
 Referenced in 17 articles
[sw08183]
 BRugs: R interface to the OpenBUGS MCMC software. Fullyinteractive R interface to the OpenBUGS ... software for Bayesian analysis using MCMC sampling. Runs natively and stably...

MCMCglmm
 Referenced in 17 articles
[sw08302]
 package MCMCglmm: MCMC Generalised Linear Mixed Models. MCMC Generalised Linear Mixed Models...

Rtwalk
 Referenced in 14 articles
[sw14215]
 Implementation of the ’twalk’ MCMC Algorithm. The ’twalk’ is a generalpurpose MCMC...

spam
 Referenced in 18 articles
[sw07965]
 simple structure(s), (3) tailored for MCMC calculations within GMRF. (4) S3 and S4 like...

R2jags
 Referenced in 10 articles
[sw11796]
 major features include monitoring convergence of a MCMC model using Rubin and Gelman Rhat statistics ... automatically running a MCMC model till it converges, and implementing parallel processing of a MCMC...

glmmAK
 Referenced in 16 articles
[sw13218]
 linear model). Secondly, Bayesian estimation based on MCMC in the logistic and Poisson regression model...