
CODA
 Referenced in 345 articles
[sw04290]
 diagnostics for MCMC , Output analysis and diagnostics for Markov Chain Monte Carlo simulations. Provides functions ... plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests ... equilibrium distribution of the Markov chain...

BUGS
 Referenced in 378 articles
[sw07885]
 complex statistical models using Markov chain Monte Carlo (MCMC) methods. The project began...

spBayes
 Referenced in 365 articles
[sw10160]
 such models involves computationally intensive Markov chain Monte Carlo (MCMC) methods whose efficiency depends upon...

GMRFLib
 Referenced in 309 articles
[sw06641]
 inference is only possible using Markov Chain Monte Carlo (MCMC) techniques. The preeminent experts...

JAGS
 Referenced in 247 articles
[sw08040]
 Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS. JAGS...

MLwiN
 Referenced in 105 articles
[sw04837]
 both maximum likelihood estimation and Markov Chain Monte Carlo (MCMC) methods. MLwiN is based...

OpenBUGS
 Referenced in 80 articles
[sw08316]
 system’, which determines an appropriate MCMC (Markov chain Monte Carlo) scheme (based on the Gibbs...

rjags
 Referenced in 64 articles
[sw08039]
 models using MCMC. Interface to the JAGS MCMC library. The rjags package provides an interface ... Bayesian data analysis. JAGS uses Markov Chain Monte Carlo (MCMC) to generate a sequence...

Mcmcpack
 Referenced in 62 articles
[sw07974]
 MCMCpack: Markov chain Monte Carlo (MCMC) Package. This package contains functions to perform Bayesian inference...

MrBayes
 Referenced in 60 articles
[sw07715]
 evolutionary models. MrBayes uses Markov chain Monte Carlo (MCMC) methods to estimate the posterior distribution...

emcee
 Referenced in 56 articles
[sw20217]
 emcee: The MCMC Hammer. We introduce a stable, well tested Python implementation ... affineinvariant ensemble sampler for Markov chain Monte Carlo (MCMC) proposed by Goodman & Weare...

BEAST
 Referenced in 53 articles
[sw12588]
 tree topology. BEAST 2 uses Markov chain Monte Carlo (MCMC) to average over tree space...

SSS
 Referenced in 34 articles
[sw07794]
 which standard approaches such as Markov chain Monte Carlo (MCMC) methods are often infeasible...

CosmoMC
 Referenced in 43 articles
[sw16206]
 CosmoMC is a Fortran 2008 MarkovChain MonteCarlo (MCMC) engine for exploring cosmological parameter...

stochvol
 Referenced in 23 articles
[sw19383]
 stochastic volatility (SV) models via Markov chain Monte Carlo (MCMC) methods...

GetDist
 Referenced in 23 articles
[sw29994]
 samples, including correlated samples from Markov Chain Monte Carlo (MCMC). Point and click GUI  select...

mcmcse
 Referenced in 21 articles
[sw08171]
 Carlo standard errors (MCSE) in Markov chain Monte Carlo (MCMC) settings. MCSE computation for expectation...

boa
 Referenced in 91 articles
[sw04493]
 Bayesian Output Analysis Program (BOA) for MCMC. A menudriven program and library of functions ... statistical and graphical analysis of Markov chain Monte Carlo sampling output...

mcmc
 Referenced in 12 articles
[sw14648]
 package. mcmc: Markov Chain Monte Carlo. Simulates continuous distributions of random vectors using Markov chain...

AMCMC
 Referenced in 15 articles
[sw01123]
 function, by performing an adaptive Markov chain Monte Carlo (MCMC) algorithm, specifically adaptive Metropoliswithin...