• NEURON

  • Referenced in 187 articles [sw03059]
  • Parallel network simulations with NEURON. The NEURON simulation environment has been extended to support parallel...
  • Pynn

  • Referenced in 18 articles [sw14128]
  • Pynn: A common interface for neuronal network simulators. PyNN (pronounced ’pine’) is a simulator-independent ... language for building neuronal network models. In other words, you can write the code ... without modification on any simulator that PyNN supports (currently NEURON, NEST, PCSIM and Brian ... required. PyNN provides a library of standard neuron, synapse and synaptic plasticity models, which have...
  • SpiNNaker

  • Referenced in 29 articles [sw40456]
  • machine will be capable of simulating a billion simple neurons, or millions of neurons with ... possible to simulate a network of tens of thousands of spiking neurons, process sensory input...
  • NEST

  • Referenced in 32 articles [sw26849]
  • computer program for simulating large heterogeneous networks of point neurons or neurons with a small...
  • Brian

  • Referenced in 29 articles [sw23588]
  • networks in python. ”Brian” is a new simulator for spiking neural networks, written in Python ... models, especially networks of single-compartment neurons. In addition to using standard types of neuron ... analysing data. Vectorisation techniques allow efficient simulations despite the overheads of an interpreted language. Brian ... especially valuable for working on non-standard neuron models not easily covered by existing software...
  • Rallpacks

  • Referenced in 6 articles [sw18102]
  • Rallpacks: a set of benchmarks for neuronal simulators. The field of computational neurobiology has advanced ... simulators to choose from. These cater to various niches in the world of realistic neuronal ... addition, there are numerous custom-designed simulations, adaptations of electrical circuit simulators, and other specific ... evaluating this disparate set of simulators and simulations, and towards establishing standards for comparisons...
  • Spikenet

  • Referenced in 12 articles [sw08892]
  • event-driven simulation package for modelling large networks of spiking neurons. Many biological neural network ... spike discharge rate is low, millions of neurons and billions of connections can be modelled ... mechanism in SpikeNET, our neural network simulation package. The type of model one can build...
  • NetPyNE

  • Referenced in 2 articles [sw41314]
  • high-level Python interface to the NEURON simulator, and reproduced the findings of the original ... implementation enabled the use of more detailed neuron models with multicompartmental morphologies and multiple biophysically ... needed when running these CPU-intensive detailed simulations. Finally, NetPyNE facilitates modifying or extending...
  • NETMORPH

  • Referenced in 3 articles [sw15125]
  • Neuronal Networks With Realistic Neuron Morphologies. We present a simulation framework, called NETMORPH ... realistic neuron morphologies. In NETMORPH, neuronal morphogenesis is simulated from the perspective of the individual ... stochastic, phenomenological manner. In this way, neurons with realistic axonal and dendritic morphologies, including neurite...
  • PyNEST

  • Referenced in 4 articles [sw30221]
  • www.nest-initiative.org) is a simulator for heterogeneous networks of point neurons or neurons with a small ... aims at simulations of large neural systems with more than 104 neurons ... NEST. PyNEST combines NEST’s efficient simulation kernel with the simplicity and flexibility of Python...
  • NEVESIM

  • Referenced in 1 article [sw39766]
  • simulation of networks of spiking neurons with a fast simulation core ... language. It supports simulation of heterogeneous networks with different types of neurons and synapses ... decouple the simulation logic of communicating events (spikes) between the neurons at a network level ... dynamics of individual neurons. In this paper we will present the simulation framework of NEVESIM...
  • Surf-Hippo

  • Referenced in 1 article [sw37102]
  • simulation of biophysically and anatomically detailed compartmental models of single neurons and networks of neurons ... time-step method for typical current clamp simulation protocols, with about a 2.5 reduction ... presented using the Surf-Hippo Neuron Simulation System, a public domain object-oriented simulator written...
  • TNT

  • Referenced in 1 article [sw19163]
  • developed software package TNT upgrading the NEURON simulation environment...
  • Neko

  • Referenced in 1 article [sw38428]
  • many tools have been developed to simulate neuronal dynamics or convert deep networks to spiking...
  • XDANNG

  • Referenced in 2 articles [sw20348]
  • multipurpose Grids. Using the Grid for simulating the neuron network will lead to a high...
  • NineML

  • Referenced in 1 article [sw40077]
  • describing the dynamics and connectivity of neuronal network simulations; in particular for large-scale simulations...
  • ANNarchy

  • Referenced in 2 articles [sw30220]
  • simulators focus on the simulation of networks of spiking neurons on parallel hardware. Another important ... difficult or impossible to implement using these simulators. We present here the ANNarchy (Artificial Neural ... simulator, which allows to easily define and simulate rate-coded and spiking networks, as well ... PyNN interface, while the definition of neuron and synapse models can be specified using...
  • CSIM

  • Referenced in 1 article [sw12748]
  • networks composed of different model neurons and synapses. This simulator is written in C++ with ... intended to simulate networks containing up to a few thousand neurons...
  • GeNN

  • Referenced in 5 articles [sw26943]
  • consistency and plausibility. An ongoing challenge for simulating realistic models is, however, computational speed ... paper, we present the GeNN (GPU-enhanced Neuronal Networks) framework, which aims to facilitate ... accelerators for computational models of large-scale neuronal networks to address this challenge. GeNN ... code to accelerate the execution of network simulations on NVIDIA GPUs, through a flexible...
  • neuroConstruct

  • Referenced in 1 article [sw40075]
  • visualization, and analysis of networks of multicompartmental neurons in 3D space. A graphical user interface ... Models within neuroConstruct are based on new simulator-independent NeuroML standards, allowing ... automatic generation of code for NEURON or GENESIS simulators. neuroConstruct was tested by reproducing published...