• pls

  • Referenced in 34 articles [sw04365]
  • Least Squares Regression (PLSR), Principal Component Regression (PCR) and Canonical Powered Partial Least Squares (CPPLS...
  • Monomvn

  • Referenced in 12 articles [sw08173]
  • Through the use of parsimonious/shrinkage regressions (plsr, pcr, lasso, ridge, etc.), where standard regressions fail...
  • CARAT

  • Referenced in 6 articles [sw35399]
  • subset of SNPs using quantitative PCR and allelic TaqMan reactions with several human breast cancer...
  • mGene

  • Referenced in 4 articles [sw23030]
  • these genes by RT-PCR and sequencing, we confirmed expression for 24 (42%) of them ... which 205 were unconfirmed. RT-PCR testing of 24 of these genes resulted...
  • IMP

  • Referenced in 5 articles [sw07913]
  • mapping data, including hybridization experiments, STS-based PCR assays, genetic linkage mapping, cDNA localization...
  • BSMAP

  • Referenced in 5 articles [sw23515]
  • cytosine methylation. Bisulfite treatment followed by PCR amplification specifically converts unmethylated cytosines to thymine. Coupled...
  • MuPlex

  • Referenced in 2 articles [sw30947]
  • MuPlex: multi-objective multiplex PCR assay design. We have developed a web-enabled system called ... aids researchers in the design of multiplex PCR assays. Multiplex PCR is a key technology ... genotyping. However, the design of a multiplex PCR assays is computationally challenging because it involves ... level. MuPlex designs a set of multiplex PCR assays designed to cover as many...
  • parallel_tdma

  • Referenced in 2 articles [sw41503]
  • solver using cyclic reduction (CR), parallel CR (PCR), and Thomas+PCR hybrid algorithm ... left per MPI process, while PCR can use full parallelism. Therefore, PCR is a good ... this implementation, we can choose CR or PCR algorithm from the level where each ... back-substituted for all rows. Hybrid Thomas-PCR algorithm is from the work of Laszlo...
  • UpGene

  • Referenced in 3 articles [sw17355]
  • optimization algorithm integrated with a PCR primer design program to redesign specific coding sequences ... expression. Using this algorithm combination, together with PCR-based gene assembly, we have successfully optimized...
  • qpcR

  • Referenced in 2 articles [sw08658]
  • real-time quantitative polymerase chain reaction (PCR) data analysis. Additionally, the package implements the most ... commonly used algorithms for real-time PCR data analysis and is capable of extensive statistical...
  • LncDisease

  • Referenced in 2 articles [sw34250]
  • PCR results showed that 11 (91.7%) of the 12 predicted lncRNAs could be validated ... with angiotensin II (Ang II). The qRT-PCR results showed that...
  • tspair

  • Referenced in 3 articles [sw20964]
  • classified using only a pair of genes, PCR based tests could be used for classification...
  • GLUE-IT

  • Referenced in 3 articles [sw33402]
  • site-saturation mutagenesis and error-prone PCR (epPCR). We introduce GLUE-Including Translation (GLUE...
  • PEDEL-AA

  • Referenced in 3 articles [sw33403]
  • site-saturation mutagenesis and error-prone PCR (epPCR). We introduce GLUE-Including Translation (GLUE...
  • MADS

  • Referenced in 3 articles [sw35537]
  • Thirty novel events were tested by RT-PCR and 27 were confirmed. This work demonstrates...
  • GenomeMasker

  • Referenced in 1 article [sw30578]
  • GENOMEMASKER package for designing unique genomic PCR primers. Background: The design of oligonucleotides ... PCR primers for studying large genomes is complicated by the redundancy of sequences. The eukaryotic ... detection of all alternative binding sites of PCR primers and the prediction of PCR products ... minutes. Additionally, it predicts all alternative PCR products from large genomes for given primer pairs...
  • Amplicon

  • Referenced in 1 article [sw11447]
  • Amplicon: software for designing PCR primers on aligned DNA sequences. Summary: Amplicon is a program ... designing PCR primers on aligned groups of DNA sequences. The most important application for Amplicon ... design of ‘group-specific’ PCR primer sets that amplify a DNA region from a given...
  • BISMA

  • Referenced in 2 articles [sw23507]
  • region of interest is targeted by PCR and about 20-50 subcloned DNA molecules...
  • HTqPCR

  • Referenced in 2 articles [sw29359]
  • analysis and visualization of quantitative real-time PCR data in R. Motivation: Quantitative real-time...
  • hoggorm

  • Referenced in 2 articles [sw29403]
  • Python. It contains PCA (principal component analysis); PCR (principal component regression); PLSR (partial least squares...