• EXPANDER

  • Referenced in 8 articles [sw30158]
  • normalization; Identification of differential genes (including methods suitable for NGS data analysis); Clustering and biclustering ... elegans, S. cerevisiae, S. pombe, arabidopsis, tomato, rice, listeria, A. fumigatus and E. coli...
  • SDM6A

  • Referenced in 0 articles [sw37445]
  • identifying 6mA sites in the rice genome. Unlike existing methods, which are based on single ... higher than those of existing methods, respectively. A user-friendly, publicly accessible web server ... predict novel putative 6mA sites in rice genome...
  • Rice Vector

  • Referenced in 4 articles [sw13923]
  • free linear algebra and optimization algorithms. The Rice Vector Library is a collection ... linear algebra and optimization, including Krylov subspace methods and various relatives of Newton’s method...
  • Rice Vector Library

  • Referenced in 4 articles [sw20169]
  • free linear algebra and optimization algorithms. The Rice Vector Library is a collection ... linear algebra and optimization, including Krylov subspace methods and various relatives of Newton’s method...
  • JIGSAW

  • Referenced in 2 articles [sw10914]
  • take advantage of the many succsessful methods for computational gene prediction and can provide substantial ... species. We have tested JIGSAW on Human, Rice (Oryza sativa), Arabidopsis thaliana, C. elegans, Brugia...
  • ALUES

  • Referenced in 1 article [sw42024]
  • Agriculture Organization (FAO) and the International Rice Research Institute (IRRI) methodology for land evaluation. Development ... following: Triangular, Trapezoidal and Gaussian. The methods for computing the overall suitability of a particular...
  • Meta-i6mA

  • Referenced in 0 articles [sw37446]
  • were inputted to six commonly used ML methods (random forest, support vector machine, extremely randomized ... Rosaceae, rice and Arabidopsis thaliana, respectively and outperformed the existing predictors. We anticipate that...
  • Mathematica

  • Referenced in 6355 articles [sw00554]
  • Almost any workflow involves computing results, and that...
  • Matlab

  • Referenced in 13544 articles [sw00558]
  • MATLAB® is a high-level language and interactive...
  • PELLPACK

  • Referenced in 20 articles [sw00698]
  • This article presents the software architecture and implementation...
  • PYTHIA

  • Referenced in 29 articles [sw00747]
  • Often scientists need to locate appropriate software for...
  • R

  • Referenced in 9969 articles [sw00771]
  • R is a language and environment for statistical...
  • ELLPACK

  • Referenced in 131 articles [sw01208]
  • Interactive ELLPACK: An interactive problem-solving environment for...
  • RELAX

  • Referenced in 6 articles [sw01328]
  • RELAX: A software platform for PDE interface relaxation...
  • GasTurbnLab

  • Referenced in 4 articles [sw01543]
  • GasTurbnLab: A multidisciplinary problem solving environment for gas...
  • SHOGUN

  • Referenced in 103 articles [sw03517]
  • The SHOGUN machine learning toolbox. We have developed...
  • SPSS

  • Referenced in 673 articles [sw04269]
  • SPSS is a computer program used for survey...
  • survival

  • Referenced in 199 articles [sw04364]
  • R package survival: Survival analysis, including penalised likelihood...
  • WinBUGS

  • Referenced in 771 articles [sw04492]
  • WinBUGS is part of the BUGS project, which...
  • PLINK

  • Referenced in 66 articles [sw04581]
  • PLINK is a free, open-source whole genome...